RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 OR5L1Q8NGL2 311 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 PPA2Q9H2U2 334 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FN3KRPQ9HA64 309 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 OSGIN2Q9Y236 505 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 MCRIP1C9JLW8 97 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 M0R233 179 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 PRSS12P56730 875 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 SEC61A1P61619 476 aaKnown RBP19.74■□□□□ 0.75
HOXD9-201ENST00000249499 TGFBR3Q03167 851 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 CHRFAM7AQ494W8 412 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 OR51F2Q8NH61 342 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 MARCH1Q8TCQ1 289 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 SARAFQ96BY9 339 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 PAPOLGQ9BWT3 736 aaKnown RBP19.74■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF407Q9C0G0 2248 aa19.74■□□□□ 0.75
HOXD9-201ENST00000249499 L7N2F9 121 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 TPD52L2O43399 206 aaKnown RBP19.73■□□□□ 0.75
HOXD9-201ENST00000249499 IFNA7P01567 189 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 PPP3CBP16298 524 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 PRDX4Q13162 271 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 GUSBP1Q15486 140 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 TAF9Q16594 264 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 CEACAM21Q3KPI0 293 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 TMEM200AQ86VY9 491 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 ZDHHC23Q8IYP9 409 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF680Q8NEM1 530 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 ELMOD3Q96FG2 381 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 PLSCR2Q9NRY7 297 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 A0A0B4J2A0 478 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 RFPL4AA6NLU0 287 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 RFPL4AL1F8VTS6 287 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 DEFB109BQ30KR1 87 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 NKAPLQ5M9Q1 402 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 TFAP2EQ6VUC0 442 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 WBP1Q96G27 269 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 EHFQ9NZC4 300 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 SHPKQ9UHJ6 478 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 STARD10Q9Y365 291 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 KCNMB2Q9Y691 235 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 FREM2Q5SZK8 3169 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 NCOR2Q9Y618 2525 aa19.73■□□□□ 0.75
HOXD9-201ENST00000249499 DNAJC13O75165 2243 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 PLATP00750 562 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 HOXB1P14653 301 aaPredicted RBP19.72■□□□□ 0.75
HOXD9-201ENST00000249499 HIKESHIQ53FT3 197 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 ELP2Q6IA86 826 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 FAM214BQ7L5A3 538 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF611Q8N823 705 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 OR13G1Q8NGZ3 307 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF75AQ96N20 296 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF701Q9NV72 531 aaPredicted RBP19.72■□□□□ 0.75
HOXD9-201ENST00000249499 GPR160Q9UJ42 338 aa19.72■□□□□ 0.75
HOXD9-201ENST00000249499 ARHGAP21Q5T5U3 1957 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 CCL2P13500 99 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 CXCL2P19875 107 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 SSTR2P30874 369 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 RBM11P57052 281 aaKnown RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 OPCMLQ14982 345 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 AADACL3Q5VUY0 350 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 FBXL14Q8N1E6 418 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 ADAD2Q8NCV1 583 aaKnown RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 OR5A2Q8NGI9 324 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 WDR89Q96FK6 387 aaPredicted RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 BOD1Q96IK1 185 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 C5orf66Q9H5L9 145 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF230Q9UIE0 474 aaPredicted RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 ST3GAL6Q9Y274 331 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 AKAP13Q12802 2813 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 PDCD6O75340 191 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 SFTPBP07988 381 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 NHLRC3Q5JS37 347 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 IGFL3Q6UXB1 125 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 OR10AD1Q8NGE0 317 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 CMSS1Q9BQ75 279 aaKnown RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 TMEM165Q9HC07 324 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 AK3Q9UIJ7 227 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 ANXA10Q9UJ72 324 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 MPC1Q9Y5U8 109 aa19.71■□□□□ 0.75
HOXD9-201ENST00000249499 TNRC6AQ8NDV7 1962 aaKnown RBP19.71■□□□□ 0.75
HOXD9-201ENST00000249499 DBX1A6NMT0 343 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 CD300LBA8K4G0 201 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 AKR1C4P17516 323 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 TMEM65Q6PI78 240 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 MDP1Q86V88 176 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 CALHM1Q8IU99 346 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 SLC30A7Q8NEW0 376 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 WNT2BQ93097 391 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 DHRS9Q9BPW9 319 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 FAAP24Q9BTP7 215 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 FREM1Q5H8C1 2179 aa19.7■□□□□ 0.74
HOXD9-201ENST00000249499 GEMIN2O14893 280 aaKnown RBP19.69■□□□□ 0.74
HOXD9-201ENST00000249499 MPC2O95563 127 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 NGFP01138 241 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 RPA2P15927 270 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 VAMP1P23763 118 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 TBC1D28Q2M2D7 210 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 SLC25A26Q70HW3 274 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 ZADH2Q8N4Q0 377 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 HPSE2Q8WWQ2 592 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 HIST1H2AAQ96QV6 131 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms