RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 RPS4Y1P22090 263 aaKnown RBP12.4□□□□□ -0.42
TARDBP-201ENST00000240185 GNB2P62879 340 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 NKAIN1Q4KMZ8 207 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 OR5M9Q8NGP3 310 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 SPSB1Q96BD6 273 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 MISP3Q96FF7 219 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-201ENST00000240185 ANKRD20A5PA0PJZ0 165 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 SLC22A20A6NK97 555 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 ZFPL1O95159 310 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 IGF2P01344 180 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 MPV17LQ2QL34 196 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 NSUN5P2Q63ZY6 315 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 TMEM174Q8WUU8 243 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 DOK5Q9P104 306 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-201ENST00000240185 CEACAM6P40199 344 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
TARDBP-201ENST00000240185 PPIAP62937 165 aaKnown RBP12.4□□□□□ -0.42
TARDBP-201ENST00000240185 FZD2Q14332 565 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 TMEM52BQ4KMG9 183 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 VASH2Q86V25 355 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 C20orf196Q8IYI0 205 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 SLC37A2Q8TED4 501 aa12.4□□□□□ -0.42
TARDBP-201ENST00000240185 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ACVR1Q04771 509 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 AESQ08117 197 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 D2HGDHQ8N465 521 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 MRPS2Q9Y399 296 aaKnown RBP12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 IGLV3-10A0A075B6K4 115 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 KLK8O60259 260 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 BSGP35613 385 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 PTGFRP43088 359 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 UBE2L3P68036 154 aaKnown RBP12.39□□□□□ -0.43
TARDBP-201ENST00000240185 C19orf57Q0VDD7 668 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 FUT7Q11130 342 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ANKRD55Q3KP44 614 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 WBP2Q969T9 261 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-201ENST00000240185 SH2D2AQ9NP31 389 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 VAX2Q9UIW0 290 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ANKRD34CP0C6C1 535 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 CDAP32320 146 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 IER3P46695 156 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 DYNLT3P51808 116 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ADPRHP54922 357 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 KISS1Q15726 138 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ZNF628Q5EBL2 1059 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 FAM74A7A6NL05 159 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 CYR61O00622 381 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 GOSR1O95249 250 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 ETHE1O95571 254 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 SP1P08047 785 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 CCL11P51671 97 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 WNT3P56703 355 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
TARDBP-201ENST00000240185 MRPL43Q8N983 215 aaKnown RBP12.39□□□□□ -0.43
TARDBP-201ENST00000240185 IDSB3KWA1 339 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 GCSHP23434 173 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 KNTC1P50748 2209 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 K7ESM1 405 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 CA2P00918 260 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 CRHP06850 196 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 HINT1P49773 126 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 CCL26Q9Y258 94 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 FGF2P09038 288 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 MRGPRX4Q96LA9 322 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 FGF22Q9HCT0 170 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 H3BMH7 237 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 ACTL6AO96019 429 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 OR1D5P58170 312 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 GMLQ99445 158 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 MRPL37Q9BZE1 423 aaKnown RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 M0R3E3 92 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 CEBPDP49716 269 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 SCAND1P57086 179 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-201ENST00000240185 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
TARDBP-201ENST00000240185 FABP2P12104 132 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms