RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MGMTP16455 207 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ANOS1P23352 680 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 MPZP25189 248 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 HLA-DMAP28067 261 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 KIR2DL3P43628 341 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-201ENST00000238688 UCP2P55851 309 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 PPP1CBP62140 327 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 RPS23P62266 143 aaKnown RBP11.32□□□□□ -0.6
SLIRP-201ENST00000238688 GNG3P63215 75 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 RSU1Q15404 277 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 AGAP6Q5VW22 663 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF554Q86TJ5 538 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF573Q86YE8 665 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 Q8IYB0 196 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 NRGNQ92686 78 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 PKIBQ9C010 78 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 GPR173Q9NS66 373 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ITGB1BP2Q9UKP3 347 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-201ENST00000238688 FAM221AA4D161 298 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 A6NIN4 97 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 TMEM210A6NLX4 147 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 MPIG6BO95866 241 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-201ENST00000238688 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 KITLGP21583 273 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 RAB25P57735 213 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 PRDX4Q13162 271 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 PCGF3Q3KNV8 242 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 FBXL19-AS1Q494R0 122 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
SLIRP-201ENST00000238688 CRIP3Q6Q6R5 217 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 SEZ6L2Q6UXD5 910 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 Q6ZTK2 550 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 RFPL4BQ6ZWI9 263 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 BTN2A1Q7KYR7 527 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 IZUMO1Q8IYV9 350 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 CADM3Q8N126 398 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 PIGCQ92535 297 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 Q96M66 194 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 MICU1Q9BPX6 476 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 RTL8AQ9BWD3 113 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-201ENST00000238688 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 ANAPC10Q9UM13 185 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 ING4Q9UNL4 249 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 PRR14LQ5THK1 2151 aa11.31□□□□□ -0.6
SLIRP-201ENST00000238688 ACANP16112 2415 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 MFNGO00587 321 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 NGFP01138 241 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 CD74P04233 296 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 TCRBP04435 133 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 GLAP06280 429 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 NAT1P18440 290 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 BMP5P22003 454 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 BTCP35070 178 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 GNG2P59768 71 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 RBMS2Q15434 407 aaKnown RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF718Q3SXZ3 478 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 CDNFQ49AH0 187 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 RSBN1Q5VWQ0 802 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF474Q6S9Z5 364 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 OR51T1Q8NGJ9 327 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 OR5P3Q8WZ94 311 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 MED30Q96HR3 178 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-201ENST00000238688 OCSTAMPQ9BR26 566 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 SPACA1Q9HBV2 294 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 HRASLSQ9HDD0 168 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 PTTG3PQ9NZH4 202 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 NLKQ9UBE8 527 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 PLEKHA6Q9Y2H5 1048 aa11.3□□□□□ -0.6
SLIRP-201ENST00000238688 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF850A8MQ14 1090 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 CECR9P0C854 216 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 VEGFCP49767 419 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 ASCL1P50553 236 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 MECP2P51608 486 aaKnown RBP11.29□□□□□ -0.6
SLIRP-201ENST00000238688 IL24Q13007 206 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms