RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 INMT-MINDY4F8WBC2 141 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 CCL21O00585 134 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 SYNGR1O43759 233 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 MPZP25189 248 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 GCH1P30793 250 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 RCVRNP35243 200 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 FAUP35544 74 aaKnown RBP12.98□□□□□ -0.33
HDHD3-201ENST00000238379 TAS2R19P59542 299 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 GNG2P59768 71 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
HDHD3-201ENST00000238379 DAZAP2Q15038 168 aaPredicted RBP12.98□□□□□ -0.33
HDHD3-201ENST00000238379 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 STEAP1BQ6NZ63 245 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 WDR86Q86TI4 376 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 GVQW1Q8N7I0 195 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 MICU1Q9BPX6 476 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 ADAT1Q9BUB4 502 aaKnown RBP12.98□□□□□ -0.33
HDHD3-201ENST00000238379 RTL8AQ9BWD3 113 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 NUDT15Q9NV35 164 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 MCUBQ9NWR8 336 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 FZR1Q9UM11 496 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 NUBP2Q9Y5Y2 271 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 NBASA2RRP1 2371 aa12.98□□□□□ -0.33
HDHD3-201ENST00000238379 F8VVB4 439 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 F8VWA3 439 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
HDHD3-201ENST00000238379 CYB5AP00167 134 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 BCL3P20749 454 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
HDHD3-201ENST00000238379 IL24Q13007 206 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 MSMPQ1L6U9 139 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 AGAP6Q5VW22 663 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 PKIBQ9C010 78 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 TMEM100Q9NV29 134 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 ANAPC10Q9UM13 185 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 TRAV6A0A075B6T7 132 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 H0YL77 283 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 MLNRO43193 412 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 TIMM8AO60220 97 aaPredicted RBP12.97□□□□□ -0.33
HDHD3-201ENST00000238379 CD74P04233 296 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 THBDP07204 575 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 CD40P25942 277 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 GLRXP35754 106 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 BTG1P62324 171 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 RGS7BPQ6MZT1 257 aaPredicted RBP12.97□□□□□ -0.33
HDHD3-201ENST00000238379 BTN2A1Q7KYR7 527 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 OR4S1Q8NGB4 309 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 CHAC2Q8WUX2 184 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 OCSTAMPQ9BR26 566 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 SPEF1Q9Y4P9 236 aa12.97□□□□□ -0.33
HDHD3-201ENST00000238379 A0A1B0GWJ7 208 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 LRP5LA4QPB2 252 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.33
HDHD3-201ENST00000238379 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 CA11O75493 328 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 RAB3DO95716 219 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF250P15622 560 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 HLA-DMAP28067 261 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 CHATP28329 748 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 RAB25P57735 213 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 FGF12P61328 243 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 ARFRP1Q13795 201 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 OR8G1Q15617 311 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 NHLRC3Q5JS37 347 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 Q6ZR03 302 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 SSX8Q7RTT4 187 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 BATF2Q8N1L9 274 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 OR10AD1Q8NGE0 317 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 OR56B4Q8NH76 319 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 FBXW5Q969U6 566 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 PPP1R14BQ96C90 147 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 PLEKHJ1Q9NW61 149 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 POU2F3Q9UKI9 436 aa12.96□□□□□ -0.33
HDHD3-201ENST00000238379 J3QT63 122 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 M0QYG6 137 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 RHBDL1O75783 438 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 NAT1P18440 290 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 RAG2P55895 527 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ESPL1Q14674 2120 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 OR52W1Q6IF63 320 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 WFDC8Q8IUA0 241 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 SCCPDHQ8NBX0 429 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 RADILQ96JH8 1075 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 TINAGL1Q9GZM7 467 aaPredicted RBP12.95□□□□□ -0.34
HDHD3-201ENST00000238379 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 COL6A6A6NMZ7 2263 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 NDUFB6O95139 128 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 H2AFB2P0C5Z0 115 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF735P0CB33 412 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms