RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ARF1P84077 181 aaKnown RBP14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DHRS11Q6UWP2 260 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 OSR2Q8N2R0 312 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 TMEM251Q8N6I4 163 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 FAAP24Q9BTP7 215 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF701Q9NV72 531 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4Q9UBX2 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 AK3Q9UIJ7 227 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 SESN1Q9Y6P5 492 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 NCKAP5O14513 1909 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 POM121CA8CG34 1229 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 KRBOX1C9JBD0 128 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 F8VVB4 439 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 F8VWA3 439 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 CTSDP07339 412 aaPredicted RBP14□□□□□ -0.17
UBE3D-201ENST00000237186 MAGEA5P43359 124 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 LUMP51884 338 aaPredicted RBP14□□□□□ -0.17
UBE3D-201ENST00000237186 ARPC4P59998 168 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 SLC9A3R2Q15599 337 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 FAM209AQ5JX71 171 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 TUSC5Q8IXB3 177 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 SUN5Q8TC36 379 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 ARPC5LQ9BPX5 153 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 CMSS1Q9BQ75 279 aaKnown RBP14□□□□□ -0.17
UBE3D-201ENST00000237186 HDHD3Q9BSH5 251 aaPredicted RBP14□□□□□ -0.17
UBE3D-201ENST00000237186 C14orf166Q9Y224 244 aaKnown RBP14□□□□□ -0.17
UBE3D-201ENST00000237186 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF587BE7ETH6 402 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 H0YIZ8 118 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 ADAP1O75689 374 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 RFC3P40938 356 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 SRYQ05066 204 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 SPEM2Q0P670 501 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 ATXN7L3Q14CW9 347 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 BVESQ8NE79 360 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 STOML3Q8TAV4 291 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 C2orf50Q96LR7 162 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 FER1L6-AS2Q96M78 137 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF471Q9BX82 626 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 PLA2G3Q9NZ20 509 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 AHCTF1Q8WYP5 2266 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 B8ZZF3 427 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 IGHV3-9P01782 118 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 NAAAQ02083 359 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 PAN3Q58A45 887 aaKnown RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 BEX5Q5H9J7 111 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 PLCXD3Q63HM9 321 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 SUMF1Q8NBK3 374 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 OR10AD1Q8NGE0 317 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 PIGCQ92535 297 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 SULT4A1Q9BR01 284 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF2Q9BSG1 426 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 SLC6A15Q9H2J7 730 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 BARX1Q9HBU1 254 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-201ENST00000237186 ACKR4Q9NPB9 350 aa13.99□□□□□ -0.17
UBE3D-201ENST00000237186 CACNA1HO95180 2353 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 GEMIN2O14893 280 aaKnown RBP13.98□□□□□ -0.17
UBE3D-201ENST00000237186 NME2P1O60361 137 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 IFNA2P01563 188 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 SFTPBP07988 381 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 SP1P08047 785 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 FCGR3AP08637 254 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 NME2P22392 152 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 PTGER4P35408 488 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 PRSS12P56730 875 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 RNPS1Q15287 305 aaKnown RBP13.98□□□□□ -0.17
UBE3D-201ENST00000237186 LINC00696Q6ZRV3 163 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 FBXL14Q8N1E6 418 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 POC1AQ8NBT0 407 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 RELL2Q8NC24 303 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-201ENST00000237186 MDS2Q8NDY4 140 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 PIK3IP1Q96FE7 263 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF75AQ96N20 296 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 LINC00052Q96N35 136 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 C1QTNF6Q9BXI9 259 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 C1orf123Q9NWV4 160 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 IL17BQ9UHF5 180 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 ST3GAL6Q9Y274 331 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-201ENST00000237186 CNTRLQ7Z7A1 2325 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 DOCK10Q96BY6 2186 aa13.98□□□□□ -0.17
UBE3D-201ENST00000237186 ZSCAN5BA6NJL1 495 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM166BA8MTA8 275 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 F5H0A9 414 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PGAM2P15259 253 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 OR51F2Q8NH61 342 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FNDC9Q8TBE3 224 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 OR10C1Q96KK4 312 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF581Q9P0T4 197 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A10PA6NDY2 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A18PA6NE21 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A16PA6NEW6 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A20PA6NIJ5 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 CRYM-AS1A6NIL9 109 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A8PA6NJQ4 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A7PA6NKC0 464 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms