RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 AMELYQ99218 206 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 Q9N2K0 584 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 ZNF701Q9NV72 531 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 CACNA1CQ13936 2221 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 AHRRA9YTQ3 701 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 CYR61O00622 381 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 TYMSP04818 313 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 TCN2P20062 427 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
MSH2-201ENST00000233146 QRFPP83859 136 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 CT45A2Q5DJT8 189 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 LINC00114Q6XXX2 140 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 CISD2Q8N5K1 135 aaKnown RBP11.44□□□□□ -0.58
MSH2-201ENST00000233146 NUDT16L1Q9BRJ7 211 aaKnown RBP11.44□□□□□ -0.58
MSH2-201ENST00000233146 TAC3Q9UHF0 121 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 B3GALT5Q9Y2C3 310 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 NPIPA5A0A0B4J1W7 369 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 NPIPA7E9PJI5 369 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 LILRA1O75019 489 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 WDR1O75083 606 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 TIMP1P01033 207 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 HBE1P02100 147 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 NPIPA8P0DM63 369 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 DUSP28Q4G0W2 176 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 Q6ZVL8 140 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 NECAP1Q8NC96 275 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 OR4D5Q8NGN0 318 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 OR6N2Q8NGY6 317 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 ADOQ96SZ5 270 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 PTPN18Q99952 460 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 PLAGL1Q9UM63 463 aa11.44□□□□□ -0.58
MSH2-201ENST00000233146 XRCC2O43543 280 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 GALR1P47211 349 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 LRRC69Q6ZNQ3 347 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 CISD1Q9NZ45 108 aaKnown RBP11.43□□□□□ -0.58
MSH2-201ENST00000233146 RNF181Q9P0P0 153 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 INSL5Q9Y5Q6 135 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 DOCK8Q8NF50 2099 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 NPIPA2E9PIF3 369 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 COCHO43405 550 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 SEMA4FO95754 770 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 BMP5P22003 454 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 CTRLP40313 264 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 CNKSR3Q6P9H4 555 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 LOXL4Q96JB6 756 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 TMEM56Q96MV1 263 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 ELOVL3Q9HB03 270 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
MSH2-201ENST00000233146 A0A1B0GUS0 222 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 ZNF320A2RRD8 509 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 OR6A2O95222 327 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 MFGE8Q08431 387 aaPredicted RBP11.43□□□□□ -0.58
MSH2-201ENST00000233146 IL13RA2Q14627 380 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 CST9LP1Q5W188 147 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 TMEM123Q8N131 208 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
MSH2-201ENST00000233146 TMEM14AQ9Y6G1 99 aa11.43□□□□□ -0.58
MSH2-201ENST00000233146 C17orf105B2RV13 164 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 VAMP5O95183 116 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 DDAH2O95865 285 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
MSH2-201ENST00000233146 ZP2Q05996 745 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 SLC17A1Q14916 467 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 MYPOPQ86VE0 399 aaPredicted RBP11.42□□□□□ -0.58
MSH2-201ENST00000233146 FBXL14Q8N1E6 418 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 GPX7Q96SL4 187 aaPredicted RBP11.42□□□□□ -0.58
MSH2-201ENST00000233146 ZBP1Q9H171 429 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 EHFQ9NZC4 300 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 MRPS28Q9Y2Q9 187 aaKnown RBP11.42□□□□□ -0.58
MSH2-201ENST00000233146 CDKN1AP38936 164 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 ASCL1P50553 236 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 RHOGP84095 191 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 ZNF266Q14584 549 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 OR14C36Q8NHC7 312 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 VN1R17PQ8TDU5 208 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 OR5B12Q96R08 314 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 NRTNQ99748 197 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 UQCR10Q9UDW1 63 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 C4orf51C9J302 202 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 HRASP01112 189 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 DBHP09172 617 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 ARF6P62330 175 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 OR2M7Q8NG81 312 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
MSH2-201ENST00000233146 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 FANCMQ8IYD8 2048 aa11.42□□□□□ -0.58
MSH2-201ENST00000233146 CLEC3AO75596 197 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms