RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RASL12Q9NYN1 266 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 GPR3P46089 330 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 SMAD4Q13485 552 aaKnown RBP11.9□□□□□ -0.5
NEK4-201ENST00000233027 OR10AC1Q8NH08 325 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 SCMH1Q96GD3 660 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 PSG11Q9UQ72 335 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 CYC1P08574 325 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 ERVS71-1P61550 626 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 TSPO2Q5TGU0 170 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 DUSP18Q8NEJ0 188 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 PECRQ9BY49 303 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 PRSS23O95084 383 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 RBP4P02753 201 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 CHRNA7P36544 502 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 CACNG5Q9UF02 275 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 SLC6A1P30531 599 aa11.9□□□□□ -0.51
NEK4-201ENST00000233027 BTNL3Q6UXE8 466 aa11.9□□□□□ -0.51
NEK4-201ENST00000233027 FRRS1LQ9P0K9 344 aa11.9□□□□□ -0.51
NEK4-201ENST00000233027 MAP1LC3B2A6NCE7 125 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 KIAA1324LA8MWY0 1029 aaPredicted RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 IGHA1P01876 353 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 GNG3P63215 75 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 Q3ZCU0 254 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 DMKNQ6E0U4 476 aaPredicted RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 Q7L0L9 218 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 M1APQ8TC57 530 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 MAP1LC3BQ9GZQ8 125 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 TAAR3PQ9P1P4 343 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 COL9A1P20849 921 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 PMS2P11Q13670 270 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 NTNG2Q96CW9 530 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 ICAM5Q9UMF0 924 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 FIGNL2A6NMB9 653 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 HSBP1O75506 76 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 DYNLT3P51808 116 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 MPPED2Q15777 294 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 PABPC1L2AQ5JQF8 200 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 DHRS7BQ6IAN0 325 aaPredicted RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 OR11G2Q8NGC1 345 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 HEXAP06865 529 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 TMEM241Q24JQ0 296 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 MESTQ5EB52 335 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 OR8B12Q8NGG6 310 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 NAT8BQ9UHF3 227 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 PTBP3O95758 552 aaKnown RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 ARG1P05089 322 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 RAG2P55895 527 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 BLNKQ8WV28 456 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
NEK4-201ENST00000233027 ZMIZ1Q9ULJ6 1067 aa11.89□□□□□ -0.51
NEK4-201ENST00000233027 RGS13O14921 159 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 OPRK1P41145 380 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 NCMAPQ5T1S8 102 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 C8orf82Q6P1X6 216 aaPredicted RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 ASB10Q8WXI3 467 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 ISOC2Q96AB3 205 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 MOB3AQ96BX8 217 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 DOCK1Q14185 1865 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 OPN1MWP04001 364 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 OPN1MW2P0DN77 364 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 OPN1MW3P0DN78 364 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 GALNSP34059 522 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 TMEM33P57088 247 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 ONECUT1Q9UBC0 465 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 ZNF141Q15928 474 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 SPNS3Q6ZMD2 512 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 KLHDC1Q8N7A1 406 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 TRAF4Q9BUZ4 470 aaPredicted RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 DOK5Q9P104 306 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 ZNF205O95201 554 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
NEK4-201ENST00000233027 CTGFP29279 349 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEK4-201ENST00000233027 ZIC1Q15915 447 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 OR2C3Q8N628 320 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 FAM60AQ9NP50 221 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 POMT1Q9Y6A1 747 aa11.88□□□□□ -0.51
NEK4-201ENST00000233027 TRGV5A0A0B4J1U4 118 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 TRGV8A0A0C4DH27 118 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 C1QCP02747 245 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 GP1BAP07359 652 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 PGA3P0DJD8 388 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 DAOP14920 347 aa11.87□□□□□ -0.51
NEK4-201ENST00000233027 ZNF83P51522 516 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms