RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PTGDSP41222 190 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 GGNBP1Q5YKI7 109 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 SPINK14Q6IE38 97 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 CMTM1Q8IZ96 169 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 AK3Q9UIJ7 227 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF816-ZNF321PA0A0X1KG74 233 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 HAAOP46952 286 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 FUT6P51993 359 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 ENDOGQ14249 297 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 MRPS24Q96EL2 167 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 OR10C1Q96KK4 312 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 PRRX2Q99811 253 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 SPIN2AQ99865 258 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 SPIN2BQ9BPZ2 258 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 C12orf49Q9H741 205 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 ANKRD30BLA7E2S9 258 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 TAAR5O14804 337 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 JTBO76095 146 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF468Q5VIY5 522 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 SRXN1Q9BYN0 137 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 LUZP4Q9P127 313 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 ST8SIA3O43173 380 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 IL2RAP01589 272 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 HOXD4P09016 255 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 RAB2AP61019 212 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 CPNE4Q96A23 557 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 NME2P1O60361 137 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 HLA-HP01893 362 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 OR5AC1P0C628 307 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 FADS6Q8N9I5 356 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 PSMF1Q92530 271 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 MRPL24Q96A35 216 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 RHOFQ9HBH0 211 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM38BQ9NVV0 291 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 MED9Q9NWA0 146 aa13.07□□□□□ -0.32
UBE2D4-201ENST00000222402 SLC34A2O95436 690 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 HOXC12P31275 282 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 ARF1P84077 181 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM268Q5VZI3 342 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 LHFPL5Q8TAF8 219 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 SF3B5Q9BWJ5 86 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 SLC26A1Q9H2B4 701 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 PLA2G3Q9NZ20 509 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 PRUNE2Q8WUY3 3088 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM218A2RU14 115 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 A8MXK9 166 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 CFPP27918 469 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 P2RY4P51582 365 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 KRBOX4Q5JUW0 171 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 TCEAL3Q969E4 200 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 CLDN23Q96B33 292 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 FBXL17Q9UF56 701 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 DHRS7CA6NNS2 312 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 ZIC3O60481 467 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 ATG12O94817 140 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 CNOT4O95628 575 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 SERPINE2P07093 398 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 RBM39Q14498 530 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 CLRN3Q8NCR9 226 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 FAM213BQ8TBF2 198 aa13.06□□□□□ -0.32
UBE2D4-201ENST00000222402 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 IGHV3-64DA0A0J9YX35 117 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 UMODP07911 640 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 FUT3P21217 361 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 UQCC3Q6UW78 93 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 TFAP2EQ6VUC0 442 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 VASH2Q86V25 355 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 RDH5Q92781 318 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PRDM6Q9NQX0 595 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 GPM6AP51674 278 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 SURF2Q15527 256 aaPredicted RBP13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 CT55Q8WUE5 264 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 WNT2BQ93097 391 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 NUDT16L1Q9BRJ7 211 aaKnown RBP13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 AIFM2Q9BRQ8 373 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 E5RGE8 158 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 HS3ST1O14792 307 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms