RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TTC9BQ8N6N2 239 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 AMER3Q8N944 861 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 TINAGQ9UJW2 476 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 OR2J1Q9GZK6 312 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 CTAG2O75638 210 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 CDS2O95674 445 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 CER1O95813 267 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 OTX1P32242 354 aaPredicted RBP9.96□□□□□ -0.81
USP31-201ENST00000219689 TMEM176BQ3YBM2 270 aaPredicted RBP9.96□□□□□ -0.81
USP31-201ENST00000219689 ALG14Q96F25 216 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 KCNK7Q9Y2U2 307 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 PLXNB2O15031 1838 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 MGAMO43451 1857 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 A0A1W2PR80 420 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 ANKRD20A5PA0PJZ0 165 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 FXYD1O00168 92 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 OR5AC1P0C628 307 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 C12orf54Q6X4T0 127 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 RNF165Q6ZSG1 346 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 SLC46A1Q96NT5 459 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 RECKO95980 971 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 HPP00738 406 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 ZNF462Q96JM2 2506 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 WNT11O96014 354 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 NPY1RP25929 384 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 MMP16P51512 607 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 CNEP1R1Q8N9A8 125 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 DHRS7CA6NNS2 312 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 HNRNPA1P09651 372 aaKnown RBP eCLIP9.96□□□□□ -0.82
USP31-201ENST00000219689 FAM87AP0C7U9 286 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 RPS27P42677 84 aaKnown RBP9.96□□□□□ -0.82
USP31-201ENST00000219689 HNRNPA1L2Q32P51 320 aaKnown RBP9.96□□□□□ -0.82
USP31-201ENST00000219689 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 VWA8A3KMH1 1905 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 H7C2G1 150 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 BCL3P20749 454 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 FAM110CQ1W6H9 321 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
USP31-201ENST00000219689 ASB1Q9Y576 335 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 F11RQ9Y624 299 aaKnown RBP9.96□□□□□ -0.82
USP31-201ENST00000219689 IQCF3P0C7M6 154 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 OR2A5Q96R48 311 aa9.96□□□□□ -0.82
USP31-201ENST00000219689 ALX4Q9H161 411 aaPredicted RBP9.96□□□□□ -0.82
USP31-201ENST00000219689 NYNRINQ9P2P1 1898 aaKnown RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 BTAF1O14981 1849 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PLA1AQ53H76 456 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 WDR25Q64LD2 544 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 RGS7BPQ6MZT1 257 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 CITED1Q99966 193 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 NOSIPQ9Y314 301 aaKnown RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 CCR2P41597 374 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 MFAP5Q13361 173 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SPNS3Q6ZMD2 512 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 GRASPQ7Z6J2 395 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 SLC5A6Q9Y289 635 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 KIAA1551Q9HCM1 1747 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PGA4P0DJD7 388 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PGA5P0DJD9 388 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 OR1C1Q15619 314 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PIPOXQ9P0Z9 390 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 TRBV11-1A0A0K0K1C0 115 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 ZNF840PA6NDX5 716 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 KLF9Q13886 244 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 NTNG2Q96CW9 530 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 NRIP2Q9BQI9 281 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 RCC2Q9P258 522 aaKnown RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 VAX2Q9UIW0 290 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 A0A1W2PQU0 124 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 METTL12A8MUP2 240 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 TMEM189-UBE2V1I3L0A0 370 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 LDLRAD4O15165 306 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 GSTZ1O43708 216 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 FGF9P31371 208 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 C12orf73Q69YU5 71 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SLCO4C1Q6ZQN7 724 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 TBX21Q9UL17 535 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 A6NNC1 897 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 ZNF732B4DXR9 585 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PNLIPRP3Q17RR3 467 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 LBX2Q6XYB7 198 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 DOK3Q7L591 496 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 GVQW1Q8N7I0 195 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 R4GMQ9 66 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 PKD1L3Q7Z443 1732 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 BLACEA4D250 179 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 GNG7O60262 68 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SRP14P37108 136 aaKnown RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 DUSP5Q16690 384 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 NIT1Q86X76 327 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 OR5AS1Q8N127 324 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 DEFB118Q96PH6 123 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 SLC6A13Q9NSD5 602 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms