RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 MGAT4AQ9UM21 535 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 VSIG4Q9Y279 399 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.01
VRK1-201ENST00000216639 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 MYO7BQ6PIF6 2116 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A10PA6NDY2 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A18PA6NE21 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A16PA6NEW6 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A20PA6NIJ5 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A8PA6NJQ4 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A7PA6NKC0 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A22PA8MWA6 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A12PA8MX19 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A5PA8MXJ8 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A23PA8MXZ1 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 K7EM74 188 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 TNFSF13O75888 250 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 CELA3BP08861 270 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A15PP0C7V4 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A13PP0C7W8 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A14PP0C7W9 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAM90A24PP0C7X0 464 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 DTYMKP23919 212 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 CHATP28329 748 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 TAS2R31P59538 309 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 PPP1CBP62140 327 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 PIGYQ3MUY2 71 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 C1orf185Q5T7R7 199 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 RIF1Q5UIP0 2472 aaKnown RBP14.95□□□□□ -0.02
VRK1-201ENST00000216639 SIGIRRQ6IA17 410 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ELP2Q6IA86 826 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 SLC25A42Q86VD7 318 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ZNF573Q86YE8 665 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
VRK1-201ENST00000216639 UXS1Q8NBZ7 420 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 Q8NFD4 153 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 OR5AP2Q8NGF4 316 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ASB13Q8WXK3 278 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 STARD4Q96DR4 205 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 CMSS1Q9BQ75 279 aaKnown RBP14.95□□□□□ -0.02
VRK1-201ENST00000216639 FAAP24Q9BTP7 215 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 GON7Q9BXV9 100 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 CHIAQ9BZP6 476 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 HSPB11Q9Y547 144 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 DMXL1Q9Y485 3027 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 OR2AT4A6NND4 320 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 PDCD6O75340 191 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 IL2RAP01589 272 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 SELEP16581 610 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 PMELP40967 661 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 GNG3P63215 75 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 OR2T2Q6IF00 324 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 C11orf88Q6PI97 169 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ZNF610Q8N9Z0 462 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 OR10AD1Q8NGE0 317 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 PPA2Q9H2U2 334 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 CA10Q9NS85 328 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ZNF230Q9UIE0 474 aaPredicted RBP14.95□□□□□ -0.02
VRK1-201ENST00000216639 AK3Q9UIJ7 227 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 ITGB1BP2Q9UKP3 347 aa14.95□□□□□ -0.02
VRK1-201ENST00000216639 TRAPPC2LH3BP13 241 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 TPD52L2O43399 206 aaKnown RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 SNAPC5O75971 98 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 OR2A4O95047 310 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 CGAP01215 116 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 IGKV3-15P01624 115 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 HLA-AP01891 365 aaKnown RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 HOXD4P09016 255 aaPredicted RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 ARPC4P59998 168 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 TSC22D1Q15714 1073 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 MPPED2Q15777 294 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 SPATA46Q5T0L3 261 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 NCCRP1Q6ZVX7 275 aaPredicted RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 CXorf67Q86X51 503 aaPredicted RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 WDR31Q8NA23 367 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 SLAMF9Q96A28 289 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 ABHD17AQ96GS6 310 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 OR2A7Q96R45 310 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 EHFQ9NZC4 300 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 CRIM1Q9NZV1 1036 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 LUZP4Q9P127 313 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 ZNF629Q9UEG4 869 aaPredicted RBP14.94□□□□□ -0.02
VRK1-201ENST00000216639 MSRB2Q9Y3D2 182 aa14.94□□□□□ -0.02
VRK1-201ENST00000216639 GOSR2O14653 212 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 RRP8O43159 456 aaKnown RBP14.93□□□□□ -0.02
VRK1-201ENST00000216639 RAC2P15153 192 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 FUT3P21217 361 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 TUBG1P23258 451 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 TIMP3P35625 211 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 UCP2P55851 309 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 FGF12P61328 243 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 DHRS2Q13268 280 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 GRK1Q15835 563 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 SEM1Q6ZVN7 128 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 MYPOPQ86VE0 399 aaPredicted RBP14.93□□□□□ -0.02
VRK1-201ENST00000216639 C9orf62Q8N4C0 152 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 MRGPRFQ96AM1 343 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 RTL8AQ9BWD3 113 aa14.93□□□□□ -0.02
VRK1-201ENST00000216639 FGF23Q9GZV9 251 aaPredicted RBP14.93□□□□□ -0.02
VRK1-201ENST00000216639 OPN3Q9H1Y3 402 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms