RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 LIPNQ5VXI9 398 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 SLC35E3Q7Z769 313 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CCDC190Q86UF4 302 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 NT5CQ8TCD5 201 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 NUDCD2Q8WVJ2 157 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 FBXO4Q9UKT5 387 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MOB4Q9Y3A3 225 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ALPK3Q96L96 1907 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 M0R2Z0 102 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GPANK1O95872 356 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CD1AP06126 327 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 HTR1DP28221 377 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ID1P41134 155 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MEOX2P50222 304 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MORN1Q5T089 497 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM108Q6UXF1 575 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF547Q8IVP9 402 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CADM3Q8N126 398 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 OTOSQ8NHW6 89 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 FGF13Q92913 245 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 A0A0A6YYC8 382 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 I3L1I5 382 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 LILRA2Q8N149 483 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 OR10G3Q8NGC4 313 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MARCH1Q8TCQ1 289 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 P2RX4Q99571 388 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 SYT11Q9BT88 431 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ALX4Q9H161 411 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 RNF39Q9H2S5 420 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 SIRT3Q9NTG7 399 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MTFP1Q9UDX5 166 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 PRNDQ9UKY0 176 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 HMGN4O00479 90 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF273Q14593 569 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 METTL27Q8N6F8 245 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TM4SF18Q96CE8 201 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 SPACA9Q96E40 222 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GNRHR2Q96P88 292 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GABRG3Q99928 467 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GPR87Q9BY21 358 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 KIAA1671Q9BY89 1806 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 A0A1B0GW15 77 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 OOEPA6NGQ2 149 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM210A6NLX4 147 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GAPDHP04406 335 aaKnown RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GYPBP06028 91 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 FAM87AP0C7U9 286 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 PVRP15151 417 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CD96P40200 585 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 PIANPQ8IYJ0 282 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CHST14Q8NCH0 376 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 OR4B1Q8NGF8 309 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 BAHD1Q8TBE0 780 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ARRDC2Q8TBH0 407 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 KISS1RQ969F8 398 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 KTI12Q96EK9 354 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 PTGDR2Q9Y5Y4 395 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 ACACBO00763 2458 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 MEIKINA0A087WXM9 373 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 DHRS7CA6NNS2 312 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 RPLP1P05386 114 aaKnown RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 RAC3P60763 192 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 EXOSC2Q13868 293 aaKnown RBP5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM268Q5VZI3 342 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM25Q86YD3 366 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM230Q96A57 120 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 TP53RKQ96S44 253 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 HES7Q9BYE0 225 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 GPR84Q9NQS5 396 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 IL36GQ9NZH8 169 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 CACNA1AO00555 2505 aa5.47□□□□□ -1.53
VPS13D-201ENST00000011700 H0Y8G0 127 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 SLC10A3P09131 477 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 NPPBP16860 134 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 PFN3P60673 137 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 C6orf15Q6UXA7 325 aaPredicted RBP5.46□□□□□ -1.53
VPS13D-201ENST00000011700 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 BPIFA4PQ86YQ2 179 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 CALHM1Q8IU99 346 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 MYOZ3Q8TDC0 251 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 OR6C1Q96RD1 312 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 ELOVL1Q9BW60 279 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 VAX2Q9UIW0 290 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 FAM208BQ5VWN6 2430 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 MFNGO00587 321 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 OR5AC1P0C628 307 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 PRELID3AQ96N28 172 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 NUP210Q8TEM1 1887 aaPredicted RBP5.46□□□□□ -1.53
VPS13D-201ENST00000011700 SLC6A12P48065 614 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 PPOXP50336 477 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 TRIM61Q5EBN2 209 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM65Q6PI78 240 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 OR5AU1Q8NGC0 362 aa5.46□□□□□ -1.53
VPS13D-201ENST00000011700 SF3B5Q9BWJ5 86 aaKnown RBP5.46□□□□□ -1.53
VPS13D-201ENST00000011700 IGFBP1P08833 259 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 CLDN18P56856 261 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 CST9Q5W186 159 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 VWA1Q6PCB0 445 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms