RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FAM166AQ6J272 317 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 WDR82Q6UXN9 313 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 ZNF826PQ6ZT77 177 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 C1orf87Q8N0U7 546 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 LRRC75A-AS1Q8N1F1 130 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 OR51F2Q8NH61 342 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 CCL17Q92583 94 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 HPS1Q92902 700 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 RFT1Q96AA3 541 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 C12orf43Q96C57 262 aaKnown RBP10.39□□□□□ -0.75
LINC00339-213ENST00000642137 RHOFQ9HBH0 211 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 A0A0G2JK05 382 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 H3BMQ9 156 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-213ENST00000642137 CDC14BO60729 498 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 RHBDL1O75783 438 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 KDM4BO94953 1096 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 IGHV4-39P01824 125 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 IRF2P14316 349 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 HTR2CP28335 458 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 POU3F4P49335 361 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 ATP5J2P56134 94 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM33P57088 247 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 OR10A3P58181 314 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 NR2C2APQ86WQ0 139 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 Q8NFD4 153 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 YIPF5Q969M3 257 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 SLC25A28Q96A46 364 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 S100A13Q99584 98 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 PCDHB16Q9NRJ7 776 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 RASL12Q9NYN1 266 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 TREM2Q9NZC2 230 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
LINC00339-213ENST00000642137 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
LINC00339-213ENST00000642137 HRNRQ86YZ3 2850 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-213ENST00000642137 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 SRRM5B3KS81 715 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 AIPO00170 330 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-213ENST00000642137 RP2O75695 350 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 FSTL3O95633 263 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 UBBP0CG47 229 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 PGA5P0DJD9 388 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 OR3A4PP47883 348 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 RORCP51449 518 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 CAPZA1P52907 286 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 CAV3P56539 151 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 GPR176Q14439 515 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 SPCS2Q15005 226 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 SFXN4Q6P4A7 337 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 TGIF2LYQ8IUE0 185 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 Q8IYB0 196 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 GCSAMQ8N6F7 178 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 OR5D18Q8NGL1 313 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 NDNFQ8TB73 568 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 TBC1D15Q8TC07 691 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 LRRC29Q8WV35 223 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 SLC25A46Q96AG3 418 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 CHODLQ9H9P2 273 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 IL36GQ9NZH8 169 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 STEAP1Q9UHE8 339 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 CACNG2Q9Y698 323 aa10.37□□□□□ -0.75
LINC00339-213ENST00000642137 AKR7A2O43488 359 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 ANGPTL7O43827 346 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 SSX4O60224 188 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 LY6HO94772 140 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 CYB5R3P00387 301 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-213ENST00000642137 PLATP00750 562 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 CSF3P09919 207 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 GLRA1P23415 457 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 PDLIM4P50479 330 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 BMXP51813 675 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 DSCR9P59020 149 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms