RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PRSS45Q7RTY3 260 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 MRPL21Q7Z2W9 205 aaKnown RBP8.37□□□□□ -1.07
PHGDH-222ENST00000641587 SPICQ8N5J4 248 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 OR5L1Q8NGL2 311 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 OR10AC1Q8NH08 325 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 GPR148Q8TDV2 347 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ITLN1Q8WWA0 313 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 WFDC12Q8WWY7 111 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 RPL3LQ92901 407 aaKnown RBP8.37□□□□□ -1.07
PHGDH-222ENST00000641587 OR14A2Q96R54 314 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 DIRC2Q96SL1 478 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 NAA50Q9GZZ1 169 aaKnown RBP8.37□□□□□ -1.07
PHGDH-222ENST00000641587 PLEKHA1Q9HB21 404 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 NDUFA13Q9P0J0 144 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF319Q9P2F9 582 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ENPP5Q9UJA9 477 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 DHDHQ9UQ10 334 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 DOCK11Q5JSL3 2073 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 A0A0U1RQV5 110 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CEACAM18A8MTB9 384 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF879B4DU55 563 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CLDN34H7C241 214 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 HOXA3O43365 443 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 MTRF1O75570 445 aaKnown RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 GPX5O75715 221 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ISG15P05161 165 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CD2P06729 351 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CFL1P23528 166 aaKnown RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 MAPK3P27361 379 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 TMBIM6P55061 237 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 PRSS12P56730 875 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 KRTAP10-3P60369 221 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 RELBQ01201 579 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 PAX2Q02962 417 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF92Q03936 586 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 PAX8Q06710 450 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 PSG7Q13046 419 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 Q499Y3 187 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ACSM3Q53FZ2 586 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 C22orf42Q6IC83 251 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 C16orf87Q6PH81 154 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 SLC16A12Q6ZSM3 486 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CEACAM19Q7Z692 300 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 LRRC28Q86X40 367 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ANKRD13BQ86YJ7 626 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 OR2Z1Q8NG97 314 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 OR51A4Q8NGJ6 313 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 RAB2BQ8WUD1 216 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 RGP1Q92546 391 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 THRSPQ92748 146 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ISOC1Q96CN7 298 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 RGCCQ9H4X1 137 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 TBCCD1Q9NVR7 557 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 OR5V1Q9UGF6 321 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 RSL24D1Q9UHA3 163 aaKnown RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 ZDHHC8Q9ULC8 765 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 GSTK1Q9Y2Q3 226 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 STARD10Q9Y365 291 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 SF3B6Q9Y3B4 125 aaKnown RBP8.36□□□□□ -1.07
PHGDH-222ENST00000641587 CEPT1Q9Y6K0 416 aa8.36□□□□□ -1.07
PHGDH-222ENST00000641587 IGHV3-64DA0A0J9YX35 117 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 TRDV1A0A1B0GX56 115 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 A0A1W2PPK0 400 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 FAM181BA6NEQ2 426 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 J3QW42 95 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 GABARAPO95166 117 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 PLATP00750 562 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 KNG1P01042 644 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 MYL9P24844 172 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 GNALP38405 381 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 VBP1P61758 197 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 NCS1P62166 190 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 ZMAT1Q5H9K5 638 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 COLCA1Q6ZS62 124 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 C1QL4Q86Z23 238 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF420Q8TAQ5 688 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM106AQ96A25 262 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 SGK3Q96BR1 496 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 LYZL4Q96KX0 146 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 CENPOQ9BU64 300 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 FAM192AQ9GZU8 254 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 OPA3Q9H6K4 179 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 CYSLTR2Q9NS75 346 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 TXNL4BQ9NX01 149 aaKnown RBP8.35□□□□□ -1.07
PHGDH-222ENST00000641587 CKLFQ9UBR5 152 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 CGGBP1Q9UFW8 167 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF391Q9UJN7 358 aa8.35□□□□□ -1.07
PHGDH-222ENST00000641587 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 TRBV5-5A0A0J9YX44 114 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 A0A1B0GTI1 187 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 A6NHS1 94 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM178BH3BS89 294 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 GATBO75879 557 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 DHRS3O75911 302 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms