RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FLOT2Q14254 428 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 ZNF829Q3KNS6 432 aaPredicted RBP13.72□□□□□ -0.21
SMN2-216ENST00000638794 ZNF684Q5T5D7 378 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 ASB17Q8WXJ9 295 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 FAM234AQ9H0X4 552 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 IKZF2Q9UKS7 526 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 TMEM14AQ9Y6G1 99 aa13.72□□□□□ -0.21
SMN2-216ENST00000638794 PRKYO43930 277 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 NRASP01111 189 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 CSF1P09603 554 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 PGA5P0DJD9 388 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 HAAOP46952 286 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 CEBPDP49716 269 aaPredicted RBP13.71□□□□□ -0.21
SMN2-216ENST00000638794 RPL31P62899 125 aaKnown RBP13.71□□□□□ -0.21
SMN2-216ENST00000638794 LRRC75BQ2VPJ9 315 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 ZNF561Q8N587 486 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 OR5K1Q8NHB7 308 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 CNN2Q99439 309 aaKnown RBP13.71□□□□□ -0.21
SMN2-216ENST00000638794 MEGF9Q9H1U4 602 aa13.71□□□□□ -0.21
SMN2-216ENST00000638794 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
SMN2-216ENST00000638794 TCRBV3S1A0A5B6 114 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 J3QT63 122 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 SLC1A7O00341 560 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 SRSF10O75494 262 aaKnown RBP13.7□□□□□ -0.22
SMN2-216ENST00000638794 PRDX2P32119 198 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 EFNB2P52799 333 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 ERVFRD-1P60508 538 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 PTGES3Q15185 160 aaKnown RBP13.7□□□□□ -0.22
SMN2-216ENST00000638794 TMEM42Q69YG0 159 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 TMEM200BQ69YZ2 307 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 CRIP3Q6Q6R5 217 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
SMN2-216ENST00000638794 PLEKHG7Q6ZR37 379 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
SMN2-216ENST00000638794 ZNF573Q86YE8 665 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 BATF2Q8N1L9 274 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 C11orf42Q8N5U0 333 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 OR4M1Q8NGD0 313 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 OR4C13Q8NGP0 309 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 GPR173Q9NS66 373 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 GTF2A1LQ9UNN4 478 aa13.7□□□□□ -0.22
SMN2-216ENST00000638794 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 A0A1W2PPH5 198 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 PQLC2LA1A4F0 135 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 LOC110117498-PIK3R3F6TDL0 507 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 M0R129 80 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 MAGEB4O15481 346 aaPredicted RBP13.69□□□□□ -0.22
SMN2-216ENST00000638794 NOS1APO75052 506 aaPredicted RBP13.69□□□□□ -0.22
SMN2-216ENST00000638794 NXPH2O95156 264 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 CCL3L1P16619 93 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 COX7A1P24310 79 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 KIR2DS4P43632 304 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 DAPP51397 102 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 BMXP51813 675 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 CXCR4P61073 352 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 ESRRGP62508 458 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 ZNF273Q14593 569 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 AANATQ16613 207 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 CLVS2Q5SYC1 327 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 BCL2L15Q5TBC7 163 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 FAHD1Q6P587 224 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 Q6ZTK2 550 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 NRBF2Q96F24 287 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 NRIP2Q9BQI9 281 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 HEXA-AS1Q9H8Q6 139 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 MOB1AQ9H8S9 216 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 USE1Q9NZ43 259 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 FOXJ3Q9UPW0 622 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 POLDIP2Q9Y2S7 368 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 R4GMQ9 66 aa13.69□□□□□ -0.22
SMN2-216ENST00000638794 A0A1B0GTI1 187 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 MEGF11A6BM72 1044 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 A6NIN4 97 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 DLGAP1O14490 977 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 PLXNB1O43157 2135 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 CHST1O43916 411 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 DNAL1Q4LDG9 190 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 ZNF782Q6ZMW2 699 aaPredicted RBP13.68□□□□□ -0.22
SMN2-216ENST00000638794 ASRGL1Q7L266 308 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 MEPCEQ7L2J0 689 aaKnown RBP13.68□□□□□ -0.22
SMN2-216ENST00000638794 ELMOD2Q8IZ81 293 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 C11orf44Q8N8P7 122 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 OR2T27Q8NH04 317 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 RANBP3Q9H6Z4 567 aaPredicted RBP13.68□□□□□ -0.22
SMN2-216ENST00000638794 ADGRL4Q9HBW9 690 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 HES4Q9HCC6 221 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 RAB18Q9NP72 206 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 OR14J1Q9UGF5 321 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 OR52A1Q9UKL2 312 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 POMPQ9Y244 141 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 V9GYS6 101 aa13.68□□□□□ -0.22
SMN2-216ENST00000638794 GYG2O15488 501 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms