RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RFT1Q96AA3 541 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 BPESC1Q9GZL8 116 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 METTL17Q9H7H0 456 aaPredicted RBP13.45□□□□□ -0.26
CLN6-216ENST00000636876 TCF7L1Q9HCS4 588 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 STUB1Q9UNE7 303 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 POLDIP2Q9Y2S7 368 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 WIPI2Q9Y4P8 454 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 NPTNQ9Y639 398 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 ZANQ9Y493 2812 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 SYNGR1O43759 233 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 RHBDL1O75783 438 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 PLATP00750 562 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 LHBP01229 141 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 GADD45AP24522 165 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 POU3F4P49335 361 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 HOXA4Q00056 320 aaPredicted RBP13.44□□□□□ -0.26
CLN6-216ENST00000636876 IL24Q13007 206 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 FAM201AQ5SY85 155 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 AVPI1Q5T686 147 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 DDI2Q5TDH0 399 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
CLN6-216ENST00000636876 YIPF6Q96EC8 236 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 CPNE2Q96FN4 548 aaPredicted RBP13.44□□□□□ -0.26
CLN6-216ENST00000636876 OR51E2Q9H255 320 aa13.44□□□□□ -0.26
CLN6-216ENST00000636876 NAV3Q8IVL0 2385 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 MEGF11A6BM72 1044 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 LGALS8O00214 317 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 AKR7A2O43488 359 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 NOS1APO75052 506 aaPredicted RBP13.43□□□□□ -0.26
CLN6-216ENST00000636876 FSTL3O95633 263 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 MAS1P04201 325 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 TFAP2AP05549 437 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 PGA5P0DJD9 388 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 EGR1P18146 543 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 SRMP19623 302 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
CLN6-216ENST00000636876 FGF9P31371 208 aaPredicted RBP13.43□□□□□ -0.26
CLN6-216ENST00000636876 CD80P33681 288 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 ALDH3B2P48448 385 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 BTG1P62324 171 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 PDZK1IP1Q13113 114 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 ZMYND11Q15326 602 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 SLC25A26Q70HW3 274 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 LRRTM1Q86UE6 522 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 MKXQ8IYA7 352 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 POC1AQ8NBT0 407 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 EXOSC4Q9NPD3 245 aaKnown RBP13.43□□□□□ -0.26
CLN6-216ENST00000636876 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
CLN6-216ENST00000636876 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 WNT9BO14905 357 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ZNF205O95201 554 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ADRA2CP18825 462 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 ZP1P60852 638 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 LRRC28Q86X40 367 aaPredicted RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 CDH26Q8IXH8 852 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 NKAIN3Q8N8D7 197 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 OR5D18Q8NGL1 313 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 TMIGD2Q96BF3 282 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 ZNF488Q96MN9 340 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 GPER1Q99527 375 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 NRIP2Q9BQI9 281 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 CHCHD6Q9BRQ6 235 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
CLN6-216ENST00000636876 PPIAL4AQ9Y536 164 aa13.42□□□□□ -0.26
CLN6-216ENST00000636876 A0A096LNT2 108 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 IGHV4-61A0A0C4DH41 118 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 ISPDA4D126 451 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 OOEPA6NGQ2 149 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 RNF223E7ERA6 249 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 SPRY1O43609 319 aaPredicted RBP13.41□□□□□ -0.26
CLN6-216ENST00000636876 CYB5AP00167 134 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 TMEM225BP0DP42 221 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 GMFBP60983 142 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 TIMM50Q3ZCQ8 353 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 TEX36Q5VZQ5 186 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 SPNS3Q6ZMD2 512 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 LYPD6Q86Y78 171 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 JAGN1Q8N5M9 183 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 ZSCAN4Q8NAM6 433 aaPredicted RBP13.41□□□□□ -0.26
CLN6-216ENST00000636876 C19orf18Q8NEA5 215 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
CLN6-216ENST00000636876 OR51F2Q8NH61 342 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms