RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SEC14L6B5MCN3 397 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 SLC22A2O15244 555 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 IDH3BO43837 385 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 FAM107AO95990 144 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 TK1P04183 234 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 SPARCP09486 303 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 SLC15A1P46059 708 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 ACTA2P62736 377 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 GRB2P62993 217 aaKnown RBP14.31□□□□□ -0.12
CLN6-212ENST00000636020 ACTG2P63267 376 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 ACTC1P68032 377 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 ACTA1P68133 377 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 IL18R1Q13478 541 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 EIF2B1Q14232 305 aaKnown RBP14.31□□□□□ -0.12
CLN6-212ENST00000636020 IFI44LQ53G44 452 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 TIGD4Q8IY51 512 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 ZDHHC23Q8IYP9 409 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 PROKR2Q8NFJ6 384 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 FANK1Q8TC84 345 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 AQP3Q92482 292 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 STMN2Q93045 179 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 IFT27Q9BW83 186 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 OR10A2Q9H208 303 aa14.31□□□□□ -0.12
CLN6-212ENST00000636020 MEX3AA1L020 520 aaKnown RBP14.3□□□□□ -0.12
CLN6-212ENST00000636020 H1F0P07305 194 aaKnown RBP14.3□□□□□ -0.12
CLN6-212ENST00000636020 BRS3P32247 399 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 GNG3P63215 75 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 FGD3Q5JSP0 725 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 CYP4Z1Q86W10 505 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 CHPT1Q8WUD6 406 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 OR8B4Q96RC9 309 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 RGCCQ9H4X1 137 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 ENPP4Q9Y6X5 453 aa14.3□□□□□ -0.12
CLN6-212ENST00000636020 DSCAML1Q8TD84 2053 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 IGHV2-26A0A0B4J1V2 119 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 TRBV4-1A0A0J9YWV2 114 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 DHRS12A0PJE2 317 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
CLN6-212ENST00000636020 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
CLN6-212ENST00000636020 ZNF732B4DXR9 585 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 M0QZK8 103 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 LY86O95711 162 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
CLN6-212ENST00000636020 FRMD6-AS1P0C7T7 363 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 HTR1DP28221 377 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 VEGFCP49767 419 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 ZNF121P58317 390 aaPredicted RBP14.29□□□□□ -0.12
CLN6-212ENST00000636020 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLN6-212ENST00000636020 SMIM21Q3B7S5 101 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 TEX30Q5JUR7 227 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 SLC35F1Q5T1Q4 408 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 LINC00471Q8N535 108 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 OR2T12Q8NG77 320 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 OR51L1Q8NGJ5 315 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 NOL4LQ96MY1 436 aaPredicted RBP14.29□□□□□ -0.12
CLN6-212ENST00000636020 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 CD300AQ9UGN4 299 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 HHLA2Q9UM44 414 aa14.29□□□□□ -0.12
CLN6-212ENST00000636020 ZNF593O00488 134 aaPredicted RBP14.28□□□□□ -0.12
CLN6-212ENST00000636020 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
CLN6-212ENST00000636020 ZNF682O95780 498 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 APOC1P02654 83 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 HSD11B1P28845 292 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 FKBP9P1Q75LS8 142 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 COMMD1Q8N668 190 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 POC1AQ8NBT0 407 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 OR4P4Q8NGL7 312 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 OR2T4Q8NH00 348 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 ZNF488Q96MN9 340 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 CDRT15Q96T59 188 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 BRD7Q9NPI1 651 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 KRCC1Q9NPI7 259 aaPredicted RBP14.28□□□□□ -0.12
CLN6-212ENST00000636020 DNAJC27Q9NZQ0 273 aa14.28□□□□□ -0.12
CLN6-212ENST00000636020 SNX3O60493 162 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 DEFB136Q30KP8 78 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 ZNF260Q3ZCT1 412 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 HAGHLQ6PII5 290 aaPredicted RBP14.27□□□□□ -0.13
CLN6-212ENST00000636020 CBLL1Q75N03 491 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 TCF23Q7RTU1 214 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 ZNF511Q8NB15 262 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 PGAM5Q96HS1 289 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 HSH2DQ96JZ2 352 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 ZNF714Q96N38 554 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 ELAC2Q9BQ52 826 aaKnown RBP14.27□□□□□ -0.13
CLN6-212ENST00000636020 TM2D3Q9BRN9 247 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 CLEC7AQ9BXN2 247 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 DPM3Q9P2X0 92 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 SESN1Q9Y6P5 492 aa14.27□□□□□ -0.13
CLN6-212ENST00000636020 K7N7A8 449 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 NPPAP01160 153 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 KIR2DS1Q14954 304 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 CEACAM21Q3KPI0 293 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 KRT74Q7RTS7 529 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 ZNF676Q8N7Q3 588 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 STON2Q8WXE9 905 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 FUZQ9BT04 418 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 TMEM133Q9H2Q1 129 aa14.26□□□□□ -0.13
CLN6-212ENST00000636020 DCLRE1BQ9H816 532 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms