RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 POC1AQ8NBT0 407 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF488Q96MN9 340 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 DSCAML1Q8TD84 2053 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 H3BUI4 141 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 SYNGR1O43759 233 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 SELENOFO60613 162 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 SASH3O75995 380 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 TK1P04183 234 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 PPP1R8Q12972 351 aaKnown RBP12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF626Q68DY1 528 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 KRT74Q7RTS7 529 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 COMMD2Q86X83 199 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 CCDC134Q9H6E4 229 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 OR14J1Q9UGF5 321 aa12.57□□□□□ -0.4
PDLIM3-213ENST00000629667 TCRBV4S1A1TA0A5B7 111 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 E9PQ18 207 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 GSC2O15499 205 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 CLIC3O95833 236 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 PRDX6P30041 224 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 DYNLT3P51808 116 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 SLC34A1Q06495 639 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 RIPPLY1Q0D2K3 151 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 LDLRAD2Q5SZI1 272 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 LCN8Q6JVE9 175 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 OR11H6Q8NGC7 330 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 ITFG2Q969R8 447 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 TAS2R1Q9NYW7 299 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
PDLIM3-213ENST00000629667 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 A0A0U1RQV5 110 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 H3BN98 237 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 NXPH2O95156 264 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 PGA5P0DJD9 388 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 ATP6V1B1P15313 513 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 HAAOP46952 286 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 DLX6P56179 175 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 MICAQ29983 383 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF573Q86YE8 665 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 IQCF1Q8N6M8 205 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 OR8B4Q96RC9 309 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 DGCR6LQ9BY27 220 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 POLDIP2Q9Y2S7 368 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 KLHDC2Q9Y2U9 406 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 U3KQV3 271 aa12.55□□□□□ -0.4
PDLIM3-213ENST00000629667 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 J3QT63 122 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 NRASP01111 189 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 RBP4P02753 201 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 EDDM3BP56851 147 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 ZNF684Q5T5D7 378 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 BATF2Q8N1L9 274 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 ASCC1Q8N9N2 400 aaKnown RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 DPF1Q92782 380 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 MYDGFQ969H8 173 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 CDRT15Q96T59 188 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 MYLK2Q9H1R3 596 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 REEP1Q9H902 201 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 GPR84Q9NQS5 396 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 ENPP5Q9UJA9 477 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
PDLIM3-213ENST00000629667 ACOD1A6NK06 481 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 K7N7A8 449 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 MAGEA2P43356 314 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 EGFEM1PQ0D2K5 195 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 MINOS1Q5TGZ0 78 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms