RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 S100A8P05109 93 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 S100A9P06702 114 aaKnown RBP16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 PCBD1P61457 104 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 UBE2V2Q15819 145 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 SFRP4Q6FHJ7 346 aaPredicted RBP16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 SCNM1Q9BWG6 230 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 ZNF69Q9UC07 566 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 WASF3Q9UPY6 502 aa16.04■□□□□ 0.16
PCDHB2-202ENST00000622947 TRAV18A0A075B6X5 111 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 LOC100509620A0A075B734 347 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 NDUFS6O75380 124 aaKnown RBP16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 IL18BPO95998 194 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 ZNF93P35789 620 aaPredicted RBP16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 RAD52P43351 418 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 GUCA2AQ02747 115 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 PGAP1Q75T13 922 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 OR10K1Q8NGX5 313 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 C1orf147Q96MC9 270 aaPredicted RBP16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 OR10A2Q9H208 303 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 PLSCR2Q9NRY7 297 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 ANKRD20A5PA0PJZ0 165 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 NAP1L6A6NFF2 107 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 LCATP04180 440 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 VSIG8P0DPA2 414 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 KCNJ3P48549 501 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 PAN3Q58A45 887 aaKnown RBP16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 TMEM88Q6PEY1 159 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 LDLRAD3Q86YD5 345 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 ZADH2Q8N4Q0 377 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 OR6K3Q8NGY3 331 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 GPN1Q9HCN4 374 aaPredicted RBP16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 PIGLQ9Y2B2 252 aa16.03■□□□□ 0.16
PCDHB2-202ENST00000622947 DISC1C4P0D8 188 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 SULT1C2O00338 296 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 AQP7O14520 342 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 ARPC1BO15143 372 aaKnown RBP16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 CREBL2O60519 120 aaPredicted RBP16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 SPP1P10451 314 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 OR3A4PP47883 348 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 DHRS7BQ6IAN0 325 aaPredicted RBP16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 ANGPTL5Q86XS5 388 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 SVBPQ8N300 66 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 NPRL2Q8WTW4 380 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 FAM46BQ96A09 425 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 REEP6Q96HR9 211 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 TSNAXQ99598 290 aaKnown RBP16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 CMSS1Q9BQ75 279 aaKnown RBP16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 MBD2Q9UBB5 411 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
PCDHB2-202ENST00000622947 SNRPGP15A8MWD9 76 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 CCL2P13500 99 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 EDN3P14138 238 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 PMPCAQ10713 525 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 ZNF626Q68DY1 528 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 UQCC3Q6UW78 93 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 SLC16A13Q7RTY0 426 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 RTN4RL2Q86UN3 420 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 WDR89Q96FK6 387 aaPredicted RBP16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 OR51M1Q9H341 326 aa16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 BARX1Q9HBU1 254 aaPredicted RBP16.02■□□□□ 0.15
PCDHB2-202ENST00000622947 GFRA3O60609 400 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 BTF3P20290 206 aaKnown RBP16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 S100PP25815 95 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 AP3S2P59780 193 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 AVPI1Q5T686 147 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 PUSL1Q8N0Z8 303 aaKnown RBP16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 RELL2Q8NC24 303 aaPredicted RBP16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 SNIP1Q8TAD8 396 aaKnown RBP16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 CYYR1Q96J86 154 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 TRIB1Q96RU8 372 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 CHST5Q9GZS9 411 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 ZMAT3Q9HA38 289 aaKnown RBP16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 RASL12Q9NYN1 266 aa16.01■□□□□ 0.15
PCDHB2-202ENST00000622947 FXYD6-FXYD2A0A087WZ82 144 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 SPDEFO95238 335 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 IL5P05113 134 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 HCKP08631 526 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 THBS4P35443 961 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 ZNF92Q03936 586 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 Q3ZCU0 254 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 HIKESHIQ53FT3 197 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 FBXW9Q5XUX1 488 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 OLFML2AQ68BL7 652 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 FAAP20Q6NZ36 180 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 Q6ZS92 163 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 ZNF584Q8IVC4 421 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 RBMXL3Q8N7X1 1067 aaKnown RBP16■□□□□ 0.15
PCDHB2-202ENST00000622947 GMPPAQ96IJ6 420 aaPredicted RBP16■□□□□ 0.15
PCDHB2-202ENST00000622947 FXYD6Q9H0Q3 95 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 A0A1W2PP11 408 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 MEIS3P1A6NDR6 274 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 GPR31O00270 319 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 SS18L1O75177 396 aaPredicted RBP16■□□□□ 0.15
PCDHB2-202ENST00000622947 ERCC1P07992 297 aaPredicted RBP16■□□□□ 0.15
PCDHB2-202ENST00000622947 UBBP0CG47 229 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 PRF1P14222 555 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 OR3A2P47893 321 aa16■□□□□ 0.15
PCDHB2-202ENST00000622947 RPS27AP62979 156 aaKnown RBP16■□□□□ 0.15
PCDHB2-202ENST00000622947 UBA52P62987 128 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms