RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 ISL1P61371 349 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 LSM6P62312 80 aaKnown RBP11.58□□□□□ -0.56
SNX12-206ENST00000622259 HIST1H3AP68431 136 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 BLMHQ13867 455 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 GINS1Q14691 196 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 ZBED5Q49AG3 693 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 KCTD21Q4G0X4 260 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 ATPAF1Q5TC12 328 aaPredicted RBP11.58□□□□□ -0.56
SNX12-206ENST00000622259 HIST2H3PS2Q5TEC6 136 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 CORO6Q6QEF8 472 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 HIST2H3AQ71DI3 136 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 OVCH2Q7RTZ1 564 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 OAFQ86UD1 273 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 C11orf42Q8N5U0 333 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 OR4X2Q8NGF9 303 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 RPS4Y2Q8TD47 263 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 GAFA1Q96PS6 74 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 P2RX4Q99571 388 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 TSSK6Q9BXA6 273 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 SNTG1Q9NSN8 517 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 TBC1D23Q9NUY8 699 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 SLC25A10Q9UBX3 287 aaPredicted RBP11.58□□□□□ -0.56
SNX12-206ENST00000622259 ZNF391Q9UJN7 358 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 COA3Q9Y2R0 106 aaPredicted RBP11.58□□□□□ -0.56
SNX12-206ENST00000622259 TPRKBQ9Y3C4 175 aa11.58□□□□□ -0.56
SNX12-206ENST00000622259 TEX13CA0A0J9YWL9 993 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 A6NIZ1 184 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 JTBO76095 146 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 NDUFB2O95178 105 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 SOX14O95416 240 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 NDUFB7P17568 137 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 PAICSP22234 425 aaKnown RBP11.57□□□□□ -0.56
SNX12-206ENST00000622259 SLC6A6P31641 620 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 GMFBP60983 142 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 RAP1BP61224 184 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 RAP1AP62834 184 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 ZNF92Q03936 586 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 FHL1Q13642 323 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 MEP1BQ16820 701 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 C6orf141Q5SZD1 244 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 MEDAGQ5VYS4 303 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 KCTD18Q6PI47 426 aaPredicted RBP11.57□□□□□ -0.56
SNX12-206ENST00000622259 SMARCD3Q6STE5 483 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 WDR82Q6UXN9 313 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 PTCHD4Q6ZW05 846 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 OR8J1Q8NGP2 316 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 FANK1Q8TC84 345 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 DUX3Q96PT4 197 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 LHFPL6Q9Y693 200 aa11.57□□□□□ -0.56
SNX12-206ENST00000622259 TRAV27A0A087WT01 109 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 F5H5K5 113 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 IFNGP01579 166 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 LCATP04180 440 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 CEBPDP49716 269 aaPredicted RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 SNRPGP62308 76 aaKnown RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 CDK5Q00535 292 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 SNAPC1Q16533 368 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 MESTQ5EB52 335 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 C12orf73Q69YU5 71 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 ZNF788Q6ZQV5 615 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 MRPL21Q7Z2W9 205 aaKnown RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 OR51D1Q8NGF3 324 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 OR2AE1Q8NHA4 323 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 FBLIM1Q8WUP2 373 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 C12orf43Q96C57 262 aaKnown RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 HDHD2Q9H0R4 259 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 WDR13Q9H1Z4 485 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 OR52D1Q9H346 318 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 RERGLQ9H628 205 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 PITPNC1Q9UKF7 332 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 SIGLEC7Q9Y286 467 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 NOP16Q9Y3C1 178 aaKnown RBP11.56□□□□□ -0.56
SNX12-206ENST00000622259 ADAM18Q9Y3Q7 739 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
SNX12-206ENST00000622259 A0A087WXM4 84 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 SH2D7A6NKC9 451 aaPredicted RBP11.55□□□□□ -0.56
SNX12-206ENST00000622259 IDH3BO43837 385 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 MRPS14O60783 128 aaKnown RBP11.55□□□□□ -0.56
SNX12-206ENST00000622259 PTP4A3O75365 173 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 RHBDL1O75783 438 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 LPLP06858 475 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 SNRNP70P08621 437 aaKnown RBP11.55□□□□□ -0.56
SNX12-206ENST00000622259 EPHA2P29317 976 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 GRK5P34947 590 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 LGALS4P56470 323 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 GABARAPL2P60520 117 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 MALLQ13021 153 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 SSX2Q16385 188 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 SNAI3Q3KNW1 292 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 FAM185AQ8N0U4 392 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 LNX2Q8N448 690 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 OR52H1Q8NGJ2 320 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 OR51A7Q8NH64 312 aa11.55□□□□□ -0.56
SNX12-206ENST00000622259 RHOXF1Q8NHV9 184 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms