RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NIT1Q86X76 327 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 PIANPQ8IYJ0 282 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 CPNE9Q8IYJ1 553 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 BLIDQ8IZY5 108 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DAW1Q8N136 415 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF433Q8N7K0 673 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 GPR32P1Q8NGA4 272 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR2G2Q8NGZ5 317 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR8U1Q8NH10 309 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 PIFOQ8TCI5 191 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 HAVCR2Q8TDQ0 301 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 MAFIPQ8WZ33 124 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 NDRG1Q92597 394 aaKnown RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 MARC2Q969Z3 335 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 RERGQ96A58 199 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DNAJC19Q96DA6 116 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TCEAL4Q96EI5 215 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 MED8Q96G25 268 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 OR10C1Q96KK4 312 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DHRS9Q9BPW9 319 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM208Q9BTX3 173 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TIPINQ9BVW5 301 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 UGT2B28Q9BY64 529 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 PRORYQ9H606 182 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF430Q9H8G1 570 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 REEP1Q9H902 201 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 DUX4Q9UBX2 424 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 CD84Q9UIB8 345 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 FBXO5Q9UKT4 447 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 CES1P1Q9UKY3 287 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 NDRG2Q9UN36 371 aaKnown RBP2.69□□□□□ -1.98
BRCA1-229ENST00000621897 ING4Q9UNL4 249 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 TP53TG1Q9Y2A0 90 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 GOLT1BQ9Y3E0 138 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 MSH6P52701 1360 aa2.69□□□□□ -1.98
BRCA1-229ENST00000621897 CCDC171Q6TFL3 1326 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 NCOA1Q15788 1441 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RLFQ13129 1914 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 A6NDN8 102 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TRIM49D1C9J1S8 452 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 LOC110117498-PIK3R3F6TDL0 507 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 C15orf65H3BRN8 121 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TAAR5O14804 337 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 AZIN1O14977 448 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 NUPL2O15504 423 aaKnown RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 HAND1O96004 215 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 MT-ND4P03905 459 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 CTSLP07711 333 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF250P15622 560 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SDC1P18827 310 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RPS12P25398 132 aaKnown RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 ARL2P36404 184 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SRP9P49458 86 aaKnown RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SULT1A1P50225 295 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SULT1A2P50226 295 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 CRYBA4P53673 196 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RBX1P62877 108 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 FAM53BQ14153 422 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TRIP13Q15645 432 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 CYP51A1Q16850 503 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 LRRC26Q2I0M4 334 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 CEACAM21Q3KPI0 293 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 ZBED5Q49AG3 693 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 PYCR3Q53H96 274 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 C1orf146Q5VVC0 180 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 HBMQ6B0K9 141 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM144Q7Z5S9 345 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 DPPA2Q7Z7J5 298 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM150AQ86TG1 271 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM135Q86UB9 458 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 THOC6Q86W42 341 aaKnown RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 HORMAD1Q86X24 394 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 LRRC25Q8N386 305 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SPICQ8N5J4 248 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 LINC01555Q8NAE3 123 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 OR2T33Q8NG76 320 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 OR8G5Q8NG78 346 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 OR10W1Q8NGF6 305 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TRUB1Q8WWH5 349 aaKnown RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RASSF5Q8WWW0 418 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM234Q8WY98 164 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SFRP2Q96HF1 295 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM56Q96MV1 263 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SCGB3A2Q96PL1 93 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 OR5B12Q96R08 314 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 TBX15Q96SF7 602 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 VAT1Q99536 393 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RASL11BQ9BPW5 248 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 PDCD1LG2Q9BQ51 273 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 NUDT9Q9BW91 350 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 ALX4Q9H161 411 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF331Q9NQX6 463 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-229ENST00000621897 GLTPQ9NZD2 209 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 GNPTGQ9UJJ9 305 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 KLK12Q9UKR0 248 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 HHLA2Q9UM44 414 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 KLF12Q9Y4X4 402 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 NID2Q14112 1375 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 SYNMO15061 1565 aa2.68□□□□□ -1.98
BRCA1-229ENST00000621897 RIMS2Q9UQ26 1411 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms