RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RBMS2Q15434 407 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 FBXL14Q8N1E6 418 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 EXTL1Q92935 676 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 B9D1Q9UPM9 204 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 IGKV3-7A0A075B6H7 116 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 PMS2P1A4D2B8 440 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 FRG2CA6NGY1 282 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 NKX6-3A6NJ46 265 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 UPK3AO75631 287 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 CRYABP02511 175 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 HOXC4P09017 264 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 GIPP09681 153 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 ACSM4P0C7M7 580 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 ZNF14P17017 642 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 NAT1P18440 290 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 NME2P22392 152 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 GNG10P50151 68 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 ELLP55199 621 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 RPS4XP62701 263 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 PRAMEF5Q5TYX0 476 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 PRAMEF6Q5VXH4 476 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 RGS7BPQ6MZT1 257 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 OR10AD1Q8NGE0 317 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 NMNAT2Q9BZQ4 307 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 EVA1AQ9H8M9 152 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 PRELID3BQ9Y3B1 194 aa7.34□□□□□ -1.23
PTPDC1-204ENST00000620992 BTBD17A6NE02 478 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 NCBP2LA6PVI3 153 aaKnown RBP7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 ALG1L2C9J202 215 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 FOXS1O43638 330 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 FADS1O60427 444 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 LPLP06858 475 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 ALDH3B1P43353 468 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 UBE2IP63279 158 aaKnown RBP7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 MC2RQ01718 297 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 BTN1A1Q13410 526 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 ELFN2Q5R3F8 820 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 RHBDD2Q6NTF9 364 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 RBMXL3Q8N7X1 1067 aaKnown RBP7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 RBMXL1Q96E39 390 aaKnown RBP7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 CXorf58Q96LI9 332 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 CMTM3Q96MX0 182 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 TSPAN32Q96QS1 320 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 AMELYQ99218 206 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 KLHDC3Q9BQ90 382 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 IER2Q9BTL4 223 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 HIPK2Q9H2X6 1198 aa7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 AKIRIN1Q9H9L7 192 aaPredicted RBP7.34□□□□□ -1.24
PTPDC1-204ENST00000620992 A0A1W2PPC1 479 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 MSTNO14793 375 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 CD3DP04234 171 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 MESTQ5EB52 335 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 PABPC1L2AQ5JQF8 200 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 THEM4Q5T1C6 240 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ZNF626Q68DY1 528 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 TMEM65Q6PI78 240 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 OR10J5Q8NHC4 309 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 FAM213BQ8TBF2 198 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ST7LQ8TDW4 575 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 SLC39A7Q92504 469 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 CMBLQ96DG6 245 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 MRI1Q9BV20 369 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 RTL8AQ9BWD3 113 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 NPDC1Q9NQX5 325 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 OSGIN2Q9Y236 505 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ETV7Q9Y603 341 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 IGHV3-43A0A0B4J1X8 118 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ZNF816-ZNF321PA0A0X1KG74 233 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 NPIPB9F8W1W9 429 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 G3V3Q6 166 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 SCGB2A1O75556 95 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 IGHV3-43DP0DP04 118 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 M6PRP20645 277 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 S100A11P31949 105 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 DSCR4P56555 118 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 GRB2P62993 217 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 EIF3IQ13347 325 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 SSPNQ14714 243 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 MSMO1Q15800 293 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ISXQ2M1V0 245 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 SP6Q3SY56 376 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 WDR38Q5JTN6 314 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 TUSC5Q8IXB3 177 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 OR6M1Q8NGM8 313 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 PBOV1Q9GZY1 135 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 PIPOXQ9P0Z9 390 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 NAV2Q8IVL1 2488 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 OR6C6A6NF89 314 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 OR4C45A6NMZ5 311 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 XRCC3O43542 346 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 CTLA4P16410 223 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 PPT1P50897 306 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 SPANXN5Q5MJ07 72 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 IL34Q6ZMJ4 242 aa7.33□□□□□ -1.24
PTPDC1-204ENST00000620992 LRRTM1Q86UE6 522 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms