RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NSG2Q9Y328 171 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 ADAMTS20P59510 1910 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 RAMP1O60894 148 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 CAMLGP49069 296 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 SUCLG1P53597 346 aaKnown RBP17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 RTL6Q6ICC9 239 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 FBXO46Q6PJ61 603 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 NFAM1Q8NET5 270 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 MALSU1Q96EH3 234 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 RSRP1Q9BUV0 290 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 C19orf12Q9NSK7 152 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 KLRF1Q9NZS2 232 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 PPP4R1LQ9P1A2 415 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 UNC13CQ8NB66 2214 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 UMAD1C9J7I0 102 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 CLN5O75503 358 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 FAHP16930 419 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 CTSSP25774 331 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 P2RY1P47900 373 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 SULT1A1P50225 295 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 OGFOD3Q6PK18 319 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 PPP1R3BQ86XI6 285 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 FAM24BQ8N5W8 94 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF784Q8NCA9 323 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 HPSE2Q8WWQ2 592 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 GNRHR2Q96P88 292 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 LMAN1LQ9HAT1 526 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 MIOXQ9UGB7 285 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 V9GYS6 101 aa17.13■□□□□ 0.33
PDLIM3-212ENST00000620787 BORCS7-ASMTA0A0B4J1R7 106 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 A0A1W2PR77 199 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 ARG1P05089 322 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 NQO2P16083 231 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 KLK2P20151 261 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 GABRR1P24046 479 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF239Q16600 458 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 RPUSD3Q6P087 351 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 MRPL38Q96DV4 380 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 ELL3Q9HB65 397 aaPredicted RBP17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 ANXA10Q9UJ72 324 aa17.12■□□□□ 0.33
PDLIM3-212ENST00000620787 IGHV1OR21-1A0A087WYE8 117 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 GPR137BO60478 399 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 C1QL1O75973 258 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 PIGPP57054 158 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 SLC35A1P78382 337 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 TMEM187Q14656 261 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 RHEBQ15382 184 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 IGSF11Q5DX21 431 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 SLC38A9Q8NBW4 561 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 HAS2Q92819 552 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 PIGTQ969N2 578 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 S100A13Q99584 98 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 SH3BGRL3Q9H299 93 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 NKX2-4Q9H2Z4 354 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 PLEKHJ1Q9NW61 149 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 ZDHHC8Q9ULC8 765 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 DHRS3O75911 302 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 OR5H8P0DN80 308 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 CD38P28907 300 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 PTGDSP41222 190 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 STARD6P59095 220 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 SP6Q3SY56 376 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 Q96M66 194 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 OXGR1Q96P68 337 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 CHST5Q9GZS9 411 aa17.11■□□□□ 0.33
PDLIM3-212ENST00000620787 RTTNQ86VV8 2226 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 LMO7DNF2Z398 122 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 TXNL1O43396 289 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 XRCC2O43543 280 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 TMEM225BP0DP42 221 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 S100PP25815 95 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 ANKRD37Q7Z713 158 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 OR1J1Q8NGS3 322 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 STT3BQ8TCJ2 826 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 EDARADDQ8WWZ3 215 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 NAA60Q9H7X0 242 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF160Q9HCG1 818 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 TINAGQ9UJW2 476 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 A0A0U1RQV5 110 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 AP4M1O00189 453 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 DIRAS3O95661 229 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 OR5AC1P0C628 307 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 MSX1P28360 303 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 EIF2S3P41091 472 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF133P52736 654 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 OR2B8PP59922 312 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 ADAM5Q6NVV9 412 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 PP6455Q8WZ26 134 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 SLC35B3Q9H1N7 401 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 STRAPQ9Y3F4 350 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 FBXO7Q9Y3I1 522 aa17.1■□□□□ 0.33
PDLIM3-212ENST00000620787 MED12Q93074 2177 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 IGHV2-70P01814 119 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 GPR157Q5UAW9 335 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 LYZL2Q7Z4W2 148 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 TCTEX1D2Q8WW35 142 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 TOMM40LQ969M1 308 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF501Q96CX3 271 aaPredicted RBP17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms