RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 MRPL41Q8IXM3 137 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 MRPL43Q8N983 215 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 PLPP5Q8NEB5 264 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 BAHD1Q8TBE0 780 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 CPNE4Q96A23 557 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 C8orf44Q96CB5 159 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 WDR92Q96MX6 357 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 TUBA4BQ9H853 241 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 CERS4Q9HA82 394 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 LMAN1LQ9HAT1 526 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 WFDC1Q9HC57 220 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 CHST11Q9NPF2 352 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 ZNF107Q9UII5 783 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 NSG2Q9Y328 171 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 A0A0A6YYD4 124 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 IGLV1-36A0A0B4J1U3 117 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 IGKV1D-43A0A0B4J1Z2 117 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 A0A0J9YY10 115 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 FAM230AA0A1W2PPH8 454 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 A6NIZ1 184 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 LDLRAD4O15165 306 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 ST8SIA3O43173 380 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 DEDDO75618 318 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 HLA-HP01893 362 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 MBP02144 154 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 APODP05090 189 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 GSTP1P09211 210 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 DANCRP0C864 163 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 OR5H8P0DN80 308 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 FCGR2AP12318 317 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 NOVA1P51513 510 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 RAP1BP61224 184 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 RND3P61587 244 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 TAF9Q16594 264 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 LCN15Q6UWW0 184 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 RTN4IP1Q8WWV3 396 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 C11orf40Q8WZ69 217 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 TSLPQ969D9 159 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 MUCL1Q96DR8 90 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 PGAM5Q96HS1 289 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 CAPNS2Q96L46 248 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 GPHA2Q96T91 129 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 CABLES2Q9BTV7 478 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 BCO1Q9HAY6 547 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 PLEKHA2Q9HB19 425 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 G6PC2Q9NQR9 355 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 PLXNA2O75051 1894 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 PHF3Q92576 2039 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 NSG1A0A0A6YYJ2 146 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 FIGNL2A6NMB9 653 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 HSPA12AO43301 675 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 ANGPTL7O43827 346 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 FOLR1P15328 257 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 APLNRP35414 380 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 GUCA1AP43080 201 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 MRPS34P82930 218 aaKnown RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 ROM1Q03395 351 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 WDR25Q64LD2 544 aaPredicted RBP5.89□□□□□ -1.47
LMO3-235ENST00000616247 TCEAL6Q6IPX3 200 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 TMEM37Q8WXS4 190 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 DYRK2Q92630 601 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 TVP23CQ96ET8 276 aa5.89□□□□□ -1.47
LMO3-235ENST00000616247 SHANK1Q9Y566 2161 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 TICRRQ7Z2Z1 1910 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 TDRD6O60522 2096 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 CABIN1Q9Y6J0 2220 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 HSPB2A8KAH6 182 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF705FA8MVS1 300 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 TMEM150CB9EJG8 249 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 PTBP3O95758 552 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 HOXC4P09017 264 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF705DP0CH99 300 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF705BP0CI00 300 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF728P0DKX0 622 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 FSTP19883 344 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 IL2RGP31785 369 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 GPR3P46089 330 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 VEGFBP49765 207 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 FOXL2P58012 376 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 HSPB2Q16082 182 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 SGCBQ16585 318 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 AADACL3Q5VUY0 350 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 FDX2Q6P4F2 183 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF574Q6ZN55 896 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF705AQ6ZN79 300 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 C1QL2Q7Z5L3 287 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 C1orf87Q8N0U7 546 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 HIST3H2BBQ8N257 126 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 OR52M1Q8NGK5 317 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 SLC37A2Q8TED4 501 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 IGFLR1Q9H665 355 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 IL17BQ9UHF5 180 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 UBE2J1Q9Y385 318 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 NOTCH4Q99466 2003 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 IGKV1D-8A0A087WSZ0 117 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 CCDC187A0A096LP49 1063 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 DHRS7CA6NNS2 312 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 FAM157AC9JC47 383 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 RER1O15258 196 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms