RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MARCH1Q8TCQ1 289 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 SPACA5Q96QH8 159 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 VAMP8Q9BV40 100 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 IFITM10A6NMD0 228 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 CST4P01036 141 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 CD22P20273 847 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 ZFP36L2P47974 494 aaKnown RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 ZNF137PP52743 207 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 ETFDHQ16134 617 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 FFAR4Q5NUL3 377 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 SLC35D3Q5M8T2 416 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 RGP1Q92546 391 aaPredicted RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 METAP1P53582 386 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 LILRB4Q8NHJ6 448 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 LKAAEAR1Q8TD35 194 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 FCRL1Q96LA6 429 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 Q96M85 177 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 SPAG8Q99932 426 aaPredicted RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 IL17CQ9P0M4 197 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 C7orf72A4D263 438 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 M0QZQ0 153 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 CRPP02741 224 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 FOXK2Q01167 660 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 EID2BQ96D98 161 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 UMAD1C9J7I0 102 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 SPRY1O43609 319 aaPredicted RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 TBX10O75333 385 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 PMS2P2O95744 297 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 LHBP01229 141 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 PITX1P78337 314 aaPredicted RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 MBNL1Q9NR56 388 aaKnown RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 KIF1AQ12756 1690 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 CDS2O95674 445 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 PTTG1O95997 202 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 GPX8Q8TED1 209 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 EXTL1Q92935 676 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
TCF4-248ENST00000616053 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
TCF4-248ENST00000616053 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 J3KTA2 159 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 NPFFO15130 113 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 PIGPP57054 158 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
TCF4-248ENST00000616053 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 H3BP45 60 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 EREGO14944 169 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 TGOLN2O43493 480 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 RIGQ13278 110 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 TMEM255BQ8WV15 326 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 DUSP8Q13202 625 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 PKMYT1Q99640 499 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 JTBO76095 146 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 HARBI1Q96MB7 349 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 MFNGO00587 321 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 SYT14P1Q58G82 188 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 GUSBP11Q6P575 273 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
TCF4-248ENST00000616053 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
TCF4-248ENST00000616053 NXF2Q9GZY0 626 aaKnown RBP11.34□□□□□ -0.59
TCF4-248ENST00000616053 TMEM200CA6NKL6 621 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 SLC25A20O43772 301 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 CR2P20023 1033 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 PDLIM4P50479 330 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
TCF4-248ENST00000616053 PATE1Q8WXA2 126 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 NEU1Q99519 415 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 DOK1Q99704 481 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
TCF4-248ENST00000616053 TARM1B6A8C7 271 aa11.33□□□□□ -0.59
TCF4-248ENST00000616053 ZNF740Q8NDX6 193 aa11.33□□□□□ -0.59
TCF4-248ENST00000616053 TDGF1P13385 188 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 SHC1P29353 583 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 Q7L0L9 218 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 CSAG2Q9Y5P2 127 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 MAS1LP35410 378 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 RBM45Q8IUH3 476 aaKnown RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 CSNK1DP48730 415 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ZNF383Q8NA42 475 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 MED29Q9NX70 200 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 PRSS21Q9Y6M0 314 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms