RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SEH1LQ96EE3 360 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 PLK3Q9H4B4 646 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 FAM212BQ9NTI7 297 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 KIF25Q9UIL4 384 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 PCM1Q15154 2024 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TOR1AO14656 332 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 RAMP1O60894 148 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 HPNP05981 417 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SELEP16581 610 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 NOVA1P51513 510 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 LINC01590Q5TEZ4 76 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 DRAM2Q6UX65 266 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SVBPQ8N300 66 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 RTN4IP1Q8WWV3 396 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 PP6455Q8WZ26 134 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 KCNK17Q96T54 332 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC25A32Q9H2D1 315 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 WDR54Q9H977 334 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TCF20Q9UGU0 1960 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 IGHV3-43A0A0B4J1X8 118 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A0G2JMM0 328 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A1W2PPB8 328 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A1W2PPC1 479 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A1W2PRS3 328 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 OR6C65A6NJZ3 312 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 KIR3DP1A8MWS1 328 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SHOXO15266 292 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 KLK10O43240 276 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SFT2D2O95562 160 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 IGHV3-43DP0DP04 118 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SNAI3Q3KNW1 292 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF468Q5VIY5 522 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ARHGEF39Q8N4T4 335 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 GPX8Q8TED1 209 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 GSX2Q9BZM3 304 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TGIF2Q9GZN2 237 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ATP23Q9Y6H3 246 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ZFP92A6NM28 416 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 NDUFB7P17568 137 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SNTB1Q13884 538 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TSC22D1Q15714 1073 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 MICBQ29980 383 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 LGALSLQ3ZCW2 172 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM128Q5BJH2 165 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF529Q6P280 563 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 CD200R1LQ6Q8B3 271 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 OR10AD1Q8NGE0 317 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 DNASE2BQ8WZ79 361 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 HGDQ93099 445 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 GPX7Q96SL4 187 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 IER2Q9BTL4 223 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 NKX6-2Q9C056 277 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 PLEKHA3Q9HB20 300 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 GBF1Q92538 1859 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TRBV5-5A0A0J9YX44 114 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TO15178 435 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TXNDC12O95881 172 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 RAC3P60763 192 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 OR11L1Q8NGX0 322 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF75AQ96N20 296 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 KLHDC3Q9BQ90 382 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 GFOD1Q9NXC2 390 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 SERPINE3A8MV23 424 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 H3BP45 60 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 P2RX3P56373 397 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 PCOLCEQ15113 449 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 HAGHQ16775 308 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ISXQ2M1V0 245 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 CST9LP1Q5W188 147 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 PPP1R35Q8TAP8 253 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF488Q96MN9 340 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM38BQ9NVV0 291 aa7.85□□□□□ -1.15
PDLIM5-222ENST00000615540 OR5AC1P0C628 307 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 S100PP25815 95 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RPP30P78346 268 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 ZP4Q12836 540 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 DCAF12L2Q5VW00 463 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 BTNL3Q6UXE8 466 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 FAM122BQ7Z309 247 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 OIT3Q8WWZ8 545 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM100Q9NV29 134 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 HTTP42858 3142 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 SPINT2O43291 252 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 GPR137BO60478 399 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 IFNA4P05014 189 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 CATR1Q13166 79 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RAB32Q13637 225 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 TESK1Q15569 626 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 C2CD4CQ8TF44 421 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 NPAS1Q99742 590 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 G6PC2Q9NQR9 355 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 IFNA10P01566 189 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 HLA-DQB1P01920 261 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 GLAP06280 429 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 AKR1C3P42330 323 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 DEGS2Q6QHC5 323 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 Q6ZRG5 221 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms