RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RNASE6Q93091 150 aaKnown RBP8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 SMIM10L1P0DMW3 83 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 SSX2Q16385 188 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 FAM27BQ5VT28 67 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 SMIM10Q96HG1 83 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 SOX7Q9BT81 388 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 RER1O15258 196 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 XRCC3O43542 346 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 LANCL1O43813 399 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 FAM106CPP0CH98 169 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 COX7A1P24310 79 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 APOBEC3AP31941 199 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 GABRA4P48169 554 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 FOXO1Q12778 655 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 CD226Q15762 336 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 HPSE2Q8WWQ2 592 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 ITPKCQ96DU7 683 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 OR5M11Q96RB7 305 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 TMEM147Q9BVK8 224 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 SLC25A10Q9UBX3 287 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF9-204ENST00000615230 TRIP12Q14669 1992 aaPredicted RBP8.59□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZC3H12DA2A288 527 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 FADS1O60427 444 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR10J4P0C629 311 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ACKR3P25106 362 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 CEACAM6P40199 344 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 S100A12P80511 92 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 TAF9Q16594 264 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 IL34Q6ZMJ4 242 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 PFDN5Q99471 154 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ACTR3CQ9C0K3 210 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 RBFOX1Q9NWB1 397 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ARPC5O15511 151 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 TXNL1O43396 289 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 VDAC1P21796 283 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 SELENOPP49908 381 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 PAFAH1B2P68402 229 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 PHC2Q8IXK0 858 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ABHD3Q8WU67 409 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 NRG4Q8WWG1 115 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 LRRC3CA6NJW4 275 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ADRA2AP08913 450 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF546Q86UE3 836 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ST8SIA2Q92186 375 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 PLPPR2Q96GM1 343 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ARV1Q9H2C2 271 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 SAV1Q9H4B6 383 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 MGAMO43451 1857 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF785A8K8V0 405 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ALOX5APP20292 161 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 HCCSP53701 268 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 UCP2P55851 309 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 IL13RA2Q14627 380 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 LYG1Q8N1E2 194 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 BBS1Q8NFJ9 593 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZMAT5Q9UDW3 170 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 PATJQ8NI35 1801 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 E5RGE8 158 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 FABP7O15540 132 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 GNB3P16520 340 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 FMODQ06828 376 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 TIMM23BQ5SRD1 257 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 BCDIN3DQ7Z5W3 292 aaKnown RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR4F17Q8NGA8 305 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR1L4Q8NGR5 311 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR4Q3Q8NH05 313 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR4F5Q8NH21 305 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF486Q96H40 463 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR4F4Q96R69 305 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF649Q9BS31 505 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 ASF1BQ9NVP2 202 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 NSG2Q9Y328 171 aa8.58□□□□□ -1.04
TNFRSF9-204ENST00000615230 SHROOM3Q8TF72 1996 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 M0QYG6 137 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 NTN3O00634 580 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 ID1P41134 155 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 OPRL1P41146 370 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 SLC35A2P78381 396 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZFP36L1Q07352 338 aaKnown RBP8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 LSAMPQ13449 338 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 HIKESHIQ53FT3 197 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 SIAH3Q8IW03 269 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 GHITMQ9H3K2 345 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 SLC52A3Q9NQ40 469 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 C7orf72A4D263 438 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 MS4A18H0YCH9 400 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 GNG10P50151 68 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 NKX6-1P78426 367 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 ETFDHQ16134 617 aa8.57□□□□□ -1.04
TNFRSF9-204ENST00000615230 MS4A18Q3C1V0 323 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms