RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SPTBP11277 2137 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 TRGV5A0A0B4J1U4 118 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 C9orf170A2RU37 121 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 PRRX1P54821 245 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 OR2B11Q5JQS5 317 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 DPPA3Q6W0C5 159 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 OR52B4Q8NGK2 314 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 NUDT8Q8WV74 236 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 ESRP2Q9H6T0 727 aaKnown RBP4.09□□□□□ -1.76
CHD9-221ENST00000615216 CLEC1BQ9P126 229 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 ZNF835Q9Y2P0 537 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 SPAG17Q6Q759 2223 aa4.09□□□□□ -1.76
CHD9-221ENST00000615216 TEX50A0A1B0GTY4 177 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 A0A1W2PN81 502 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SPRY1O43609 319 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 CHRNA7P36544 502 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GFERP55789 205 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PDZD11Q5EBL8 140 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 GPR119Q8TDV5 335 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ADTRPQ96IZ2 230 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PRRX2Q99811 253 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 FOXB1Q99853 325 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PRDM7Q9NQW5 492 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ONECUT1Q9UBC0 465 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 METTL12A8MUP2 240 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SLC38A11Q08AI6 406 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SSPNQ14714 243 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 KISS1Q15726 138 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 CEACAM16Q2WEN9 425 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 DEFB109BQ30KR1 87 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ZNF528Q3MIS6 628 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PLAC9Q5JTB6 97 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GTF2H5Q6ZYL4 71 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 UBAC2Q8NBM4 344 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SPACA5Q96QH8 159 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 TSPAN32Q96QS1 320 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ATP5SQ99766 215 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 TMEM231Q9H6L2 316 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PLPP3O14495 311 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PGFP49763 221 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 EMP3P54852 163 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 WDR38Q5JTN6 314 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PRSS36Q5K4E3 855 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SLC25A30Q5SVS4 291 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 MRM1Q6IN84 353 aaKnown RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 TRILQ7L0X0 811 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 LIMS2Q7Z4I7 341 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GLCCI1Q86VQ1 547 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PATE1Q8WXA2 126 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GPR137Q96N19 417 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 MAGT1Q9H0U3 335 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ZNF646O15015 1829 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 ELOA3CA0A087WX78 387 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 A0A1W2PPQ1 181 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SH2D7A6NKC9 451 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 ADAM20O43506 726 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 HIST1H3AP68431 136 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 TMEM267Q0VDI3 215 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 GUK1Q16774 197 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 MICBQ29980 383 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 LRRTM1Q86UE6 522 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 BATF2Q8N1L9 274 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ANAPC16Q96DE5 110 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SAT2Q96F10 170 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 C3orf85A0A1B0GTC6 90 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PEX11BO96011 259 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 INHBBP09529 407 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 TGFBR1P36897 503 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 CEACAM6P40199 344 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ZNF154Q13106 437 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 DHRS2Q13268 280 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 FAM74A3Q4VXF1 159 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 KHDC1LQ5JSQ8 128 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SSX8Q7RTT4 187 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 CCL4L1Q8NHW4 92 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 MOB3AQ96BX8 217 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GRAMD2BQ96HH9 432 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 LRFN3Q9BTN0 628 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 VN1R1Q9GZP7 353 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 SH2D2AQ9NP31 389 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ZNF275Q9NSD4 429 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 C2CD4DB7Z1M9 353 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 AKR7A2O43488 359 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 HMGA2P52926 109 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 WNT3P56703 355 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 PNRC1Q12796 327 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 TMEM211Q6ICI0 200 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 C20orf196Q8IYI0 205 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 OR13G1Q8NGZ3 307 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 OR4C3Q8NH37 302 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 OR6X1Q8NH79 312 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 GPBAR1Q8TDU6 330 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ZNF707Q96C28 371 aaPredicted RBP4.08□□□□□ -1.76
CHD9-221ENST00000615216 ARHGAP5-AS1Q96IT6 56 aa4.08□□□□□ -1.76
CHD9-221ENST00000615216 ALKBH3Q96Q83 286 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms