RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 FBXO8Q9NRD0 319 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 KLK11Q9UBX7 282 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 NUP205Q92621 2012 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 MEX3AA1L020 520 aaKnown RBP17.93■□□□□ 0.46
CTDP1-208ENST00000613122 ASB5Q8WWX0 329 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 FGF11Q92914 225 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 ABCA3Q99758 1704 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 OR6C3Q9NZP0 311 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 ZNF727A8MUV8 499 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 C1QBP02746 253 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 SLC25A4P12235 298 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 OPRK1P41145 380 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 Q3ZCU0 254 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 SMIM4Q8WVI0 70 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 SEC14L6B5MCN3 397 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 TMEM128Q5BJH2 165 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 MOGAT1Q96PD6 335 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 PCOLCE2Q9UKZ9 415 aa17.93■□□□□ 0.46
CTDP1-208ENST00000613122 F5P12259 2224 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 LIMK1P53667 647 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 AVPI1Q5T686 147 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 ACSM6Q6P461 480 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 OR2M7Q8NG81 312 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 SIRT3Q9NTG7 399 aaPredicted RBP17.92■□□□□ 0.46
CTDP1-208ENST00000613122 SLC35D1Q9NTN3 355 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 BOLA1Q9Y3E2 137 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 MOSPD3O75425 235 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 AQP8O94778 261 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 CCL3P10147 92 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 MAGEB1P43366 347 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 RPUSD4Q96CM3 377 aaKnown RBP17.92■□□□□ 0.46
CTDP1-208ENST00000613122 RHNO1Q9BSD3 238 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 NTN4Q9HB63 628 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 THSD7AQ9UPZ6 1657 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 EML2O95834 649 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 HIST1H1DP16402 221 aaKnown RBP17.92■□□□□ 0.46
CTDP1-208ENST00000613122 CTLA4P16410 223 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 PTP4A1Q93096 173 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 UBE2L5PA0A1B0GUS4 154 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 PPP5D1E7EU14 171 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 ASCL1P50553 236 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 MMP15P51511 669 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 MSRB3Q8IXL7 192 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 LIPT2A6NK58 231 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 FGF2P09038 288 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 FPR2P25090 351 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 PXDC1Q5TGL8 231 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 VSTM2LQ96N03 204 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 FKBP11Q9NYL4 201 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 OR5V1Q9UGF6 321 aa17.92■□□□□ 0.46
CTDP1-208ENST00000613122 IGHV3-43A0A0B4J1X8 118 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 B4E171 279 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 H3BP45 60 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 IGHV4-34P06331 123 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 IGHV3-43DP0DP04 118 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 S100A4P26447 101 aaKnown RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 TSPAN7P41732 249 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 CNN1P51911 297 aaKnown RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 RPUSD3Q6P087 351 aaKnown RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 DPF1Q92782 380 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 HGDQ93099 445 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 GRAMD2BQ96HH9 432 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 NRTNQ99748 197 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 FAAP24Q9BTP7 215 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 TMEM147Q9BVK8 224 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 ADGRL4Q9HBW9 690 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 TMEM272A0A1B0GTI8 110 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 PRR27Q6MZM9 219 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 SAP30LQ9HAJ7 183 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 IL36GQ9NZH8 169 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 NTMQ9P121 344 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 ICAM5Q9UMF0 924 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 DBX1A6NMT0 343 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 SLC31A2O15432 143 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 PDGFBP01127 241 aaPredicted RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 EXOSC2Q13868 293 aaKnown RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 TIPARPQ7Z3E1 657 aaKnown RBP17.91■□□□□ 0.46
CTDP1-208ENST00000613122 CHRDL1Q9BU40 450 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 THYN1Q9P016 225 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 FTH1P19P0C7X4 201 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 CALCRP30988 508 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 BRS3P32247 399 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 LPAR6P43657 344 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 MRGPRDQ8TDS7 321 aa17.91■□□□□ 0.46
CTDP1-208ENST00000613122 ENDOGQ14249 297 aaKnown RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 ZNF441Q8N8Z8 693 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 ZNRF4Q8WWF5 429 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 ZNF275Q9NSD4 429 aaPredicted RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 CNTRLQ7Z7A1 2325 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 MYO5AQ9Y4I1 1855 aaKnown RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 MPZL1O95297 269 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 OR4A8P0C604 315 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 CLDN20P56880 219 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 NEIL1Q96FI4 390 aaPredicted RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 SEBOXQ9HB31 216 aaPredicted RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 SIRT5Q9NXA8 310 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 ZNF230Q9UIE0 474 aaPredicted RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 A0A1W2PRD5 423 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 A0A1W2PRF3 423 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms