RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SOCS6O14544 535 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 B4GALT3O60512 393 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SOD2P04179 222 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ELLP55199 621 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 C16orf82Q7Z2V1 217 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 NUP43Q8NFH3 380 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR52E5Q8NH55 327 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ABHD3Q8WU67 409 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ADAT3Q96EY9 351 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TOX2Q96NM4 488 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PDCD1LG2Q9BQ51 273 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 J3KTA2 159 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PNLIPRP2P54317 469 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 HEPN1Q6WQI6 88 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SSBP4Q9BWG4 385 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SLC22A13Q9Y226 551 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TNFSF12O43508 249 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 LANCL1O43813 399 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SSSCA1O60232 199 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TMPRSS11DO60235 418 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 VTNP04004 478 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TACR1P25103 407 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 LPAR6P43657 344 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 Q7L0L9 218 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 RBM45Q8IUH3 476 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 DIRC2Q96SL1 478 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SPXQ9BT56 116 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 GLOD5A6NK44 160 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 GRXCR1A8MXD5 290 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 CDK5R1Q15078 307 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 Q56UQ5 140 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PYY3Q5JQD4 70 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 FAM129CQ86XR2 697 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 DNASE2BQ8WZ79 361 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 MRGPRX1Q96LB2 322 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 RBKSQ9H477 322 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 GFYI3L273 518 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 EN2P19622 333 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ADRA1AP35348 466 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SDHAF4Q5VUM1 108 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SLC25A26Q70HW3 274 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 H1FOOQ8IZA3 346 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SPSB2Q99619 263 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HS3ST4Q9Y661 456 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 A0A1W2PQ45 241 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 A0A1W2PQY0 241 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CD8AP01732 235 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HTR6P50406 440 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 EGR3Q06889 387 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CCL15Q16663 113 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 DUSP28Q4G0W2 176 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 TTC9BQ8N6N2 239 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 MRPL13Q9BYD1 178 aaKnown RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CLEC5AQ9NY25 188 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF256Q9Y2P7 627 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 FBLL1A6NHQ2 334 aaKnown RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 UPK3BL1B0FP48 263 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 UPK3BL2E5RIL1 263 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GJB3O75712 270 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HYAL1Q12794 435 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 WDFY1Q8IWB7 410 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SMIM8Q96KF7 97 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LMO2P25791 158 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LILRA4P59901 499 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF764Q96H86 408 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 TRAV9-2A0A087WT02 112 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 DPRXA6NFQ7 191 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HEPACAM2A8MVW5 462 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CTXN1P60606 82 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 C2orf73Q8N5S3 287 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HSD17B8Q92506 261 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 RGP1Q92546 391 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SPATC1LQ9H0A9 340 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CASTOR2A6NHX0 329 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF217O75362 1048 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 APODP05090 189 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 UQCRFS1P47985 274 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ZXDBP98169 803 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SSPNQ14714 243 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 RTL8BQ17RB0 113 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 PLXDC2Q6UX71 529 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR1N1Q8NGS0 311 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 MRPL38Q96DV4 380 aaKnown RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GDF15Q99988 308 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 PRSS16Q9NQE7 514 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CMC2Q9NRP2 79 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 RHBDD3Q9Y3P4 386 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CEP192Q8TEP8 1941 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 EFSO43281 561 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HIST1H1DP16402 221 aaKnown RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HOXA11P31270 313 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GNG4P50150 75 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 RPS23P62266 143 aaKnown RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 EFNB1P98172 346 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GDF6Q6KF10 455 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR10G4Q8NGN3 311 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR10AG1Q8NH19 301 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CFHR5Q9BXR6 569 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ST3GAL6Q9Y274 331 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LIPGQ9Y5X9 500 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms