RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 CCDC124Q96CT7 223 aaKnown RBP12.08□□□□□ -0.48
CTSA-216ENST00000607212 SDSLQ96GA7 329 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 MROQ9BYG7 248 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 PBOV1Q9GZY1 135 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 MEGF9Q9H1U4 602 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 ENPP5Q9UJA9 477 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 ZNF222Q9UK12 451 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 IKZF2Q9UKS7 526 aa12.08□□□□□ -0.48
CTSA-216ENST00000607212 XPNPEP2O43895 674 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 CHST1O43916 411 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 NRASP01111 189 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 ARG1P05089 322 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 RAP2AP10114 183 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 CCL3L1P16619 93 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 PRDX2P32119 198 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 HAAOP46952 286 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 APOFQ13790 326 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 AANATQ16613 207 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 ZNF829Q3KNS6 432 aaPredicted RBP12.07□□□□□ -0.48
CTSA-216ENST00000607212 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 LCN8Q6JVE9 175 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 CD300LDQ6UXZ3 194 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 ZNF561Q8N587 486 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 OR5K1Q8NHB7 308 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 OR5M11Q96RB7 305 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
CTSA-216ENST00000607212 SYNGR1O43759 233 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 MTRF1O75570 445 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 CD28P10747 220 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 RIDAP52758 137 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 EMX1Q04741 257 aaPredicted RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 DYNC1I2Q13409 638 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 TRIM25Q14258 630 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 GK3PQ14409 553 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 HABP2Q14520 560 aaPredicted RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 LCN1P1Q5VSP4 162 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 ASRGL1Q7L266 308 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 LHFPL4Q7Z7J7 247 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 TMEM219Q86XT9 240 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 ARHGAP24Q8N264 748 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 CD177Q8N6Q3 437 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 ASCC1Q8N9N2 400 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 GPR173Q9NS66 373 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.06□□□□□ -0.48
CTSA-216ENST00000607212 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
CTSA-216ENST00000607212 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
CTSA-216ENST00000607212 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 MEX3AA1L020 520 aaKnown RBP12.05□□□□□ -0.48
CTSA-216ENST00000607212 ACOD1A6NK06 481 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 OSMP13725 252 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 ATP6V1B1P15313 513 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 ALOX5APP20292 161 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 RAB13P51153 203 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 EDDM3BP56851 147 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 ZNF273Q14593 569 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 SNAPC1Q16533 368 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 OXLD1Q5BKU9 147 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 Q6ZPA2 131 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 ZNF573Q86YE8 665 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 OR13D1Q8NGV5 346 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 BCAS4Q8TDM0 211 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 CFHR4Q92496 578 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 NSL1Q96IY1 281 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 TVP23BQ9NYZ1 205 aa12.05□□□□□ -0.48
CTSA-216ENST00000607212 A0A1W2PRX2 142 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 J3QT63 122 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 F2RL2O00254 374 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 DHRS3O75911 302 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 MS4A2Q01362 244 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 CNN3Q15417 329 aaKnown RBP12.04□□□□□ -0.48
CTSA-216ENST00000607212 SSX2Q16385 188 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 CLVS2Q5SYC1 327 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TMEM236Q5W0B7 351 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TRPM8Q7Z2W7 1104 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TRMT10AQ8TBZ6 339 aaKnown RBP12.04□□□□□ -0.48
CTSA-216ENST00000607212 FOXRED1Q96CU9 486 aaPredicted RBP12.04□□□□□ -0.48
CTSA-216ENST00000607212 AJUBAQ96IF1 538 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TEAD3Q99594 435 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 PRSS22Q9GZN4 317 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 MMP28Q9H239 520 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 ZNF702PQ9H963 129 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 PITPNC1Q9UKF7 332 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TCF19Q9Y242 345 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 TMEM14AQ9Y6G1 99 aa12.04□□□□□ -0.48
CTSA-216ENST00000607212 ARRDC5A6NEK1 342 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 A6NIN4 97 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 H3BUI4 141 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 INMTO95050 263 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms