RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 IGLV3-1P01715 115 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 ATP1B3P54709 279 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 FXYD4P59646 89 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
CTSA-214ENST00000606788 CHRFAM7AQ494W8 412 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 ZNF767PQ75MW2 155 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 OR2A7Q96R45 310 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 SPRR3Q9UBC9 169 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 KCNN3Q9UGI6 736 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 LILRA1O75019 489 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 ZNF24P17028 368 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 RBP2P50120 134 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 SOX8P57073 446 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 OR51F2Q8NH61 342 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 SSC4DQ8WTU2 575 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 MFFQ9GZY8 342 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
CTSA-214ENST00000606788 COQ3Q9NZJ6 369 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 EMC3Q9P0I2 261 aa13.78□□□□□ -0.2
CTSA-214ENST00000606788 MELTFP08582 738 aa13.77□□□□□ -0.2
CTSA-214ENST00000606788 MMP7P09237 267 aaPredicted RBP13.77□□□□□ -0.2
CTSA-214ENST00000606788 CD46P15529 392 aa13.77□□□□□ -0.2
CTSA-214ENST00000606788 SIGIRRQ6IA17 410 aa13.77□□□□□ -0.2
CTSA-214ENST00000606788 OR13G1Q8NGZ3 307 aa13.77□□□□□ -0.2
CTSA-214ENST00000606788 ZNF488Q96MN9 340 aa13.77□□□□□ -0.2
CTSA-214ENST00000606788 F8VVB4 439 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 F8VWA3 439 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 KLRC4-KLRK1H3BQV0 150 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 DNPH1O43598 174 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 OR7C1O76099 320 aaPredicted RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 GPM6AP51674 278 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 FAM74A1Q5RGS3 127 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 JMJD6Q6NYC1 403 aaPredicted RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 TMUB2Q71RG4 321 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 OR2W3Q7Z3T1 314 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 BOLLQ8N9W6 283 aaKnown RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 RELL2Q8NC24 303 aaPredicted RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 PPP1R1CQ8WVI7 109 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 STARD10Q9Y365 291 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 TRAV14DV4A0A0A6YYC5 116 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 APOC1P02654 83 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 NAT2P11245 290 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 SSBP1Q04837 148 aaKnown RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.77□□□□□ -0.21
CTSA-214ENST00000606788 TERB2Q8NHR7 220 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 SULT4A1Q9BR01 284 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 GTF3C1Q12789 2109 aa13.77□□□□□ -0.21
CTSA-214ENST00000606788 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
CTSA-214ENST00000606788 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 MSTNO14793 375 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 EFSO43281 561 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 CPT2P23786 658 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 MECP2P51608 486 aaKnown RBP13.76□□□□□ -0.21
CTSA-214ENST00000606788 CLN3Q13286 438 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 LYG2Q86SG7 212 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 ZNF546Q86UE3 836 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 GSKIPQ9P0R6 139 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 ST3GAL6Q9Y274 331 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 KLF13Q9Y2Y9 288 aaPredicted RBP13.76□□□□□ -0.21
CTSA-214ENST00000606788 NME2P1O60361 137 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 SCO1O75880 301 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 HOXB5P09067 269 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 GSTP1P09211 210 aaKnown RBP13.76□□□□□ -0.21
CTSA-214ENST00000606788 NME2P22392 152 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 ZBTB25P24278 435 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 ARPC4P59998 168 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 UBQLN2Q9UHD9 624 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 AK3Q9UIJ7 227 aa13.76□□□□□ -0.21
CTSA-214ENST00000606788 TRGV5A0A0B4J1U4 118 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 hCG_38984A0A1B0GV85 526 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 H3BUI4 141 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 TPPPO94811 219 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 SELEP16581 610 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 HOXA4Q00056 320 aaPredicted RBP13.75□□□□□ -0.21
CTSA-214ENST00000606788 CAMK2BQ13554 666 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 CLVS2Q5SYC1 327 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 C3P1Q6ZMU1 363 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 CNEP1R1Q8N9A8 125 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 MDS2Q8NDY4 140 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 GPHA2Q96T91 129 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 PPA2Q9H2U2 334 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 TNRC6AQ8NDV7 1962 aaKnown RBP13.75□□□□□ -0.21
CTSA-214ENST00000606788 ADGRG4Q8IZF6 3080 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
CTSA-214ENST00000606788 LYZL6O75951 148 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 CELA3BP08861 270 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 SERPINF1P36955 418 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 HAAOP46952 286 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 PCBD1P61457 104 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 ZNF611Q8N823 705 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 POLEQ07864 2286 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms