RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LOXP28300 417 aaPredicted RBP19.21■□□□□ 0.67
IRF3-228ENST00000601291 APOBEC3AP31941 199 aaPredicted RBP19.21■□□□□ 0.67
IRF3-228ENST00000601291 ZNF81P51508 661 aa19.21■□□□□ 0.67
IRF3-228ENST00000601291 TMEM69Q5SWH9 247 aa19.21■□□□□ 0.67
IRF3-228ENST00000601291 TMEM200AQ86VY9 491 aa19.21■□□□□ 0.67
IRF3-228ENST00000601291 OR10K1Q8NGX5 313 aa19.21■□□□□ 0.67
IRF3-228ENST00000601291 URM1Q9BTM9 101 aaKnown RBP19.21■□□□□ 0.67
IRF3-228ENST00000601291 CISD1Q9NZ45 108 aaKnown RBP19.21■□□□□ 0.67
IRF3-228ENST00000601291 POLDIP2Q9Y2S7 368 aa19.21■□□□□ 0.67
IRF3-228ENST00000601291 PLAUP00749 431 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 MGMTP16455 207 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 CDK2P24941 298 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 IL24Q13007 206 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 MADCAM1Q13477 382 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 ZNF672Q499Z4 452 aaPredicted RBP19.2■□□□□ 0.66
IRF3-228ENST00000601291 WDR86Q86TI4 376 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 TMEM104Q8NE00 496 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 NEUROG1Q92886 237 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 ELMOD3Q96FG2 381 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 DHRS9Q9BPW9 319 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 SOSTQ9BQB4 213 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 BANF2Q9H503 90 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 ZDHHC8Q9ULC8 765 aa19.2■□□□□ 0.66
IRF3-228ENST00000601291 A0A0A6YYH2 397 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 IGKV1-12A0A0C4DH73 117 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 A6NJ64 397 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 HTR3BO95264 441 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 IGKV1D-12P01611 117 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 GTF2F2P13984 249 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 MPZP25189 248 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 CD200P41217 278 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 PITPNAQ00169 270 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 ZNF154Q13106 437 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 ZNF79Q15937 498 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 PYDC2Q56P42 97 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 RAB12Q6IQ22 244 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 PYHIN1Q6K0P9 492 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 DTX3Q8N9I9 347 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 C15orf40Q8WUR7 153 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 ZFAND2BQ8WV99 257 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 GTF3AQ92664 365 aaKnown RBP19.19■□□□□ 0.66
IRF3-228ENST00000601291 SLAMF9Q96A28 289 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 GAL3ST1Q99999 423 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 A0A1W2PP11 408 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 TRAPPC2LH3BP13 241 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 XRCC3O43542 346 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 GRPP07492 148 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 TNFSF4P23510 183 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 RPS27AP62979 156 aaKnown RBP19.19■□□□□ 0.66
IRF3-228ENST00000601291 DCTN2Q13561 401 aaKnown RBP19.19■□□□□ 0.66
IRF3-228ENST00000601291 GDPD1Q8N9F7 314 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 SCCPDHQ8NBX0 429 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 AQP3Q92482 292 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 DIRC2Q96SL1 478 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 CCDC32Q9BV29 185 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 SRRQ9GZT4 340 aa19.19■□□□□ 0.66
IRF3-228ENST00000601291 MRPS7Q9Y2R9 242 aaKnown RBP19.19■□□□□ 0.66
IRF3-228ENST00000601291 A0A0G2JMP0 313 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 A0A0X1KG70 313 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 M0R233 179 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 SPRY3O43610 288 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 TPPPO94811 219 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 MAB21L1Q13394 359 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 EFNB3Q15768 340 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 C16orf87Q6PH81 154 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 MEX3BQ6ZN04 569 aaKnown RBP19.18■□□□□ 0.66
IRF3-228ENST00000601291 IZUMO1Q8IYV9 350 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 ACBD4Q8NC06 268 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 OR4M2Q8NGB6 313 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 MRPS24Q96EL2 167 aaKnown RBP19.18■□□□□ 0.66
IRF3-228ENST00000601291 SELENOIQ9C0D9 397 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 LPAR5Q9H1C0 372 aa19.18■□□□□ 0.66
IRF3-228ENST00000601291 B9A039 149 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 SYNGR1O43759 233 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 CHRM2P08172 466 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 RNF224P0DH78 156 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 CPT2P23786 658 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 MNDAP41218 407 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 SRP9P49458 86 aaKnown RBP19.17■□□□□ 0.66
IRF3-228ENST00000601291 BIVMQ86UB2 503 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 OSR2Q8N2R0 312 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 CELF2-AS1Q8N7Q2 184 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 OR56B1Q8NGI3 324 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 OR51T1Q8NGJ9 327 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 LILRB1Q8NHL6 650 aaPredicted RBP19.17■□□□□ 0.66
IRF3-228ENST00000601291 RHOFQ9HBH0 211 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 PALMDQ9NP74 551 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 MTCH1Q9NZJ7 389 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 CADP27708 2225 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 ZNF462Q96JM2 2506 aa19.17■□□□□ 0.66
IRF3-228ENST00000601291 A6NLC8 198 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 CDIPTO14735 213 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 IGHV1-46P01743 117 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 SFTPBP07988 381 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 BCL3P20749 454 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 TAS2R20P59543 309 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 DAZAP2Q15038 168 aaPredicted RBP19.16■□□□□ 0.66
IRF3-228ENST00000601291 FBXL14Q8N1E6 418 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 NUDT16L1Q9BRJ7 211 aaKnown RBP19.16■□□□□ 0.66
IRF3-228ENST00000601291 TM2D1Q9BX74 207 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms