RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PRDX2P32119 198 aa14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 MFGE8Q08431 387 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 PLCXD3Q63HM9 321 aa14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 KCTD18Q6PI47 426 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 C11orf88Q6PI97 169 aa14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 Q6ZTK2 550 aa14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 ZNF679Q8IYX0 411 aa14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 RANBP3Q9H6Z4 567 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-208ENST00000601220 GNGT2O14610 69 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 DHRS3O75911 302 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 NRASP01111 189 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 TTRP02766 147 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 MRPL3P09001 348 aaKnown RBP14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 ANXA8P13928 327 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 CEBPDP49716 269 aaPredicted RBP14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 DLX6P56179 175 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 RPL31P62899 125 aaKnown RBP14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 SAMD5Q5TGI4 173 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 Q6ZSR3 168 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 DYNAPQ8N1N2 210 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF561Q8N587 486 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 OR4C13Q8NGP0 309 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 NRIP2Q9BQI9 281 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 HEXA-AS1Q9H8Q6 139 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF556Q9HAH1 456 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 HES4Q9HCC6 221 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 TVP23BQ9NYZ1 205 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 ENPP5Q9UJA9 477 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 DNAH3Q8TD57 4116 aa14.58□□□□□ -0.08
CHMP2A-208ENST00000601220 A0A1B0GTI1 187 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 PQLC2LA1A4F0 135 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 GSC2O15499 205 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 CCL3L1P16619 93 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 HAAOP46952 286 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 BMXP51813 675 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 CAPZA1P52907 286 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 ERVK11-1P61568 191 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 EFNB1P98172 346 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF273Q14593 569 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 SNAPC1Q16533 368 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 SMIM21Q3B7S5 101 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 KLHDC1Q8N7A1 406 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 C11orf44Q8N8P7 122 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 OR4M1Q8NGD0 313 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 ASB17Q8WXJ9 295 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 THTPAQ9BU02 230 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 V9GYS6 101 aa14.57□□□□□ -0.08
CHMP2A-208ENST00000601220 VGLL3A8MV65 326 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 J3QT63 122 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 MAGEB4O15481 346 aaPredicted RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 E2F6O75461 281 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 HOXB6P17509 224 aaKnown RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 MPZP25189 248 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 RIDAP52758 137 aaKnown RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 CRISP1P54107 249 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF829Q3KNS6 432 aaPredicted RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 LDLRAD2Q5SZI1 272 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF684Q5T5D7 378 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 CCBE1Q6UXH8 406 aaPredicted RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 LIAT1Q6ZQX7 453 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 BCDIN3DQ7Z5W3 292 aaKnown RBP14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 LHFPL4Q7Z7J7 247 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 COMMD2Q86X83 199 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF573Q86YE8 665 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 CALHM1Q8IU99 346 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 ELMOD2Q8IZ81 293 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 Q8N2B8 174 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 OR14K1Q8NGZ2 314 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 OR2T27Q8NH04 317 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 TTTY10Q9BZA0 68 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 ZNF702PQ9H963 129 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 RAB18Q9NP72 206 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 GPR173Q9NS66 373 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 DNAJB9Q9UBS3 223 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 TMEM14AQ9Y6G1 99 aa14.56□□□□□ -0.08
CHMP2A-208ENST00000601220 C17orf98A8MV24 154 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 SLC1A7O00341 560 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 DLGAP1O14490 977 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 PRKYO43930 277 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 TK1P04183 234 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 COX7A1P24310 79 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 DAPP51397 102 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 CBX1P83916 185 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 FBLN7Q53RD9 439 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 CLVS2Q5SYC1 327 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 FAHD1Q6P587 224 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 OR2T6Q8NHC8 308 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 WIPF2Q8TF74 440 aaPredicted RBP14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 APOL4Q9BPW4 351 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 SERTAD4Q9NUC0 356 aa14.55□□□□□ -0.08
CHMP2A-208ENST00000601220 TET2Q6N021 2002 aaPredicted RBP14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 TCRBV3S1A0A5B6 114 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 ODF3BA8MYP8 253 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 FKBP6O75344 327 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 RAB13P51153 203 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 PTGES3Q15185 160 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 LCN1P1Q5VSP4 162 aa14.54□□□□□ -0.08
CHMP2A-208ENST00000601220 AADACL4Q5VUY2 407 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms