RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 H3BSH0 61 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 M0R129 80 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 FKBP6O75344 327 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 INMTO95050 263 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 PRDX2P32119 198 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 HAAOP46952 286 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 CRISP1P54107 249 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 LGALS4P56470 323 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 RPL31P62899 125 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 FLOT2Q14254 428 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF829Q3KNS6 432 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 HCP5Q6MZN7 132 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 PLEKHG7Q6ZR37 379 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 OR8B4Q96RC9 309 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 SLC25A19Q9HC21 320 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 PAPOLBQ9NRJ5 636 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 DNAJB9Q9UBS3 223 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 OR5B21A6NL26 309 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 SLC1A7O00341 560 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 NXPH2O95156 264 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 VSIG10L2P0DP72 767 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 CCL3L1P16619 93 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 ODF4Q2M2E3 257 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 LRRC75BQ2VPJ9 315 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 SMIM21Q3B7S5 101 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 BCL2L15Q5TBC7 163 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 TMEM200BQ69YZ2 307 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF782Q6ZMW2 699 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF679Q8IYX0 411 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 OR4C13Q8NGP0 309 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 SDSLQ96GA7 329 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 CNN2Q99439 309 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 RASL12Q9NYN1 266 aa14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 H2AFY2Q9P0M6 372 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-223ENST00000600552 LOC110117498-PIK3R3F6TDL0 507 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 GYG2O15488 501 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 PRKYO43930 277 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 MTRF1O75570 445 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 FAM107AO95990 144 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 ATP6V1B1P15313 513 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 BMXP51813 675 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 DEGS2Q6QHC5 323 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF322Q6U7Q0 402 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 LYG1Q8N1E2 194 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 POC1AQ8NBT0 407 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 TRMT10AQ8TBZ6 339 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 ASB17Q8WXJ9 295 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 HEXA-AS1Q9H8Q6 139 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 FBLN5Q9UBX5 448 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 TMEM14AQ9Y6G1 99 aa14.31□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A1W2PPH5 198 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF254O75437 659 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 DHRS3O75911 302 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 RPP14O95059 124 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 TTRP02766 147 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 CXCR4P61073 352 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 HERPUD1Q15011 391 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 PTGES3Q15185 160 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 CLVS2Q5SYC1 327 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 ANGPTL5Q86XS5 388 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF573Q86YE8 665 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 SLC35F2Q8IXU6 374 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 KLHDC1Q8N7A1 406 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 TCEANCQ8N8B7 351 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 NUFIP1Q9UHK0 495 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 OR52A1Q9UKL2 312 aa14.3□□□□□ -0.12
SHKBP1-223ENST00000600552 hCG_1809904A0A1W2PP81 198 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A1W2PPE2 198 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 FAM230AA0A1W2PPH8 454 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A1W2PR64 198 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A1W2PRV1 198 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF670-ZNF695F2Z2N8 137 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 J3QT63 122 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 MITFO75030 526 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 RAB13P51153 203 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 DAPP51397 102 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF273Q14593 569 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 MEPCEQ7L2J0 689 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 ZNF561Q8N587 486 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 ASCC1Q8N9N2 400 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 OR2T6Q8NHC8 308 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 AJUBAQ96IF1 538 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 TBX5Q99593 518 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 USE1Q9NZ43 259 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 SLC22A13Q9Y226 551 aa14.29□□□□□ -0.12
SHKBP1-223ENST00000600552 PGA5P0DJD9 388 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 ACTR3P61158 418 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 ROM1Q03395 351 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 NSUN5P1Q3KNT7 163 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 ZBTB37Q5TC79 503 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 LHFPL4Q7Z7J7 247 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 IL4I1Q96RQ9 567 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 POLDIP2Q9Y2S7 368 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 R4GMQ9 66 aa14.28□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A0G2JK05 382 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 PQLC2LA1A4F0 135 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 G3V4G9 280 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 CHST1O43916 411 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 IGLV3-1P01715 115 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms