RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 BEST4Q8NFU0 473 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 OR51S1Q8NGJ8 323 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 SFXN3Q9BWM7 321 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 IFT46Q9NQC8 304 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 HMX3A6NHT5 357 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 CECR9P0C854 216 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 CPT2P23786 658 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 EIF2B2P49770 351 aaKnown RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 C17orf78Q8N4C9 275 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 S100PBPQ96BU1 408 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 NUDT16L1Q9BRJ7 211 aaKnown RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 TINAGL1Q9GZM7 467 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 FGF23Q9GZV9 251 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 PQLC2LA1A4F0 135 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 ARPC1BO15143 372 aaKnown RBP13.02□□□□□ -0.33
HIF3A-218ENST00000600383 SSX5O60225 188 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 ZNF780AO75290 641 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-218ENST00000600383 GSTP1P09211 210 aaKnown RBP13.02□□□□□ -0.33
HIF3A-218ENST00000600383 IGFBP7Q16270 282 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 NKPD1Q17RQ9 610 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 C6orf201Q7Z4U5 140 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 TMEM229BQ8NBD8 167 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 BOD1Q96IK1 185 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 PLEKHJ1Q9NW61 149 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 POU2F3Q9UKI9 436 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 PCNX1Q96RV3 2341 aa13.02□□□□□ -0.33
HIF3A-218ENST00000600383 HEATR1Q9H583 2144 aaKnown RBP13.02□□□□□ -0.33
HIF3A-218ENST00000600383 NPBWR2P48146 333 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 FAM27E3Q08E93 113 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 PDCD1Q15116 288 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ALKBH6Q3KRA9 238 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 RADILQ96JH8 1075 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 GINS4Q9BRT9 223 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 TM2D1Q9BX74 207 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 PECRQ9BY49 303 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ACTR6Q9GZN1 396 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 A0A0G2JNJ9 132 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 GEMIN2O14893 280 aaKnown RBP13.01□□□□□ -0.33
HIF3A-218ENST00000600383 AMY2AP04746 511 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 OPRM1P35372 400 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ZNF83P51522 516 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 CD83Q01151 205 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 FBXW12Q6X9E4 464 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 PXT1Q8NFP0 134 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 CHAC2Q8WUX2 184 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 GIMAP1Q8WWP7 306 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 OR5P3Q8WZ94 311 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 SLAMF9Q96A28 289 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 Q96M66 194 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ST6GALNAC5Q9BVH7 336 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 Q9UFV3 132 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 PAIP2BQ9ULR5 123 aaKnown RBP13.01□□□□□ -0.33
HIF3A-218ENST00000600383 ST3GAL6Q9Y274 331 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
HIF3A-218ENST00000600383 IGHV1-18A0A0C4DH31 117 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 A8MXE2 369 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 J3QW42 95 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 MFNGO00587 321 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 ZNF35P13682 527 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 RAD52P43351 418 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 SNU13P55769 128 aaKnown RBP13□□□□□ -0.33
HIF3A-218ENST00000600383 SCGB2B2Q4G0G5 96 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 BRICD5Q6PL45 260 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 OR6F1Q8NGZ6 308 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 KLF14Q8TD94 323 aaPredicted RBP13□□□□□ -0.33
HIF3A-218ENST00000600383 DEDD2Q8WXF8 326 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 MUCL1Q96DR8 90 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 OBP2BQ9NPH6 170 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
HIF3A-218ENST00000600383 FZR1Q9UM11 496 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 AMDHD2Q9Y303 409 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 MPC1Q9Y5U8 109 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 IGHV3-64DA0A0J9YX35 117 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 PEX14O75381 377 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 NDUFB6O95139 128 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 RLN1P04808 185 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 FABP6P51161 128 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 PSG7Q13046 419 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 HAGHLQ6PII5 290 aaPredicted RBP13□□□□□ -0.33
HIF3A-218ENST00000600383 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 FAAP24Q9BTP7 215 aa13□□□□□ -0.33
HIF3A-218ENST00000600383 ATRXP46100 2492 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-218ENST00000600383 M0R1B8 84 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 MSTNO14793 375 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 ICMTO60725 284 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
HIF3A-218ENST00000600383 BCL3P20749 454 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 HRH1P35367 487 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 MPV17P39210 176 aa12.99□□□□□ -0.33
HIF3A-218ENST00000600383 RBMS2Q15434 407 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms