RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SPRY1O43609 319 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 LHBP01229 141 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 CSF3P09919 207 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 GIFP27352 417 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 CD80P33681 288 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 CFHR2P36980 270 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 AVPI1Q5T686 147 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 SHEQ5VZ18 495 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 SLC25A26Q70HW3 274 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 BATF2Q8N1L9 274 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 HPS1Q92902 700 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 BPESC1Q9GZL8 116 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 NAA50Q9GZZ1 169 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 CSMD2Q7Z408 3487 aa16.82■□□□□ 0.28
SHKBP1-222ENST00000600320 IGKV1-12A0A0C4DH73 117 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 VWC2LB2RUY7 222 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 CLDN25C9JDP6 229 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 IFNL4K9M1U5 179 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 WNT9BO14905 357 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 MAGEB3O15480 346 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 PPIHO43447 177 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 AKR7A2O43488 359 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 ANGPTL7O43827 346 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 IGKV1D-12P01611 117 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 IRF2P14316 349 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 ZNF93P35789 620 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 TGFBR1P36897 503 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 GPR6P46095 362 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 RPL5P46777 297 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 OR3A4PP47883 348 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 TMEM33P57088 247 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 GMFBP60983 142 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 IL24Q13007 206 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 PDZK1IP1Q13113 114 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 GPR141Q7Z602 305 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 WFDC11Q8NEX6 87 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 OR10Z1Q8NGY1 313 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 SLAMF9Q96A28 289 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 SEH1LQ96EE3 360 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 SNTG1Q9NSN8 517 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 AK6Q9Y3D8 172 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 WIPI2Q9Y4P8 454 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 NPTNQ9Y639 398 aa16.81■□□□□ 0.28
SHKBP1-222ENST00000600320 LRRC30A6NM36 301 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 SRRM5B3KS81 715 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 AIREO43918 545 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 DSCR9P59020 149 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 LSM3P62310 102 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 C1QL2Q7Z5L3 287 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 POC1AQ8NBT0 407 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 ZNF671Q8TAW3 534 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 Q96MF0 132 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 GPER1Q99527 375 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 SLITRK2Q9H156 845 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 WDR13Q9H1Z4 485 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 MTCH1Q9NZJ7 389 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 POLDIP2Q9Y2S7 368 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 TACC2O95359 2948 aa16.8■□□□□ 0.28
SHKBP1-222ENST00000600320 IGHV3OR15-7A0A075B7D8 119 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 TRAV1-2A0A0B4J238 106 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 MEGF11A6BM72 1044 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 F8VVB4 439 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 F8VWA3 439 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 NDUFS8O00217 210 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 IGHV2-70P01814 119 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 PGA5P0DJD9 388 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 CD37P11049 281 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 MYL9P24844 172 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 ZMYND11Q15326 602 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 TIMM50Q3ZCQ8 353 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 GPR107Q5VW38 600 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 SFRP4Q6FHJ7 346 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 SLC16A12Q6ZSM3 486 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 C1orf87Q8N0U7 546 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 JAGN1Q8N5M9 183 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 NKAIN3Q8N8D7 197 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 TNFAIP8L1Q8WVP5 186 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 NRIP2Q9BQI9 281 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 PIMREGQ9BSJ6 248 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 CNTD2Q9H8S5 307 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 GSTK1Q9Y2Q3 226 aa16.79■□□□□ 0.28
SHKBP1-222ENST00000600320 PPIAL4EA0A075B759 164 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 SMIM30A4D0T7 59 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 PPIAL4DF5H284 164 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 NOS1APO75052 506 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 PPIAL4FP0DN26 164 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 TMEM225BP0DP42 221 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 NR4A2P43354 598 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 NPBWR2P48146 333 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 OR10A3P58181 314 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 ERVK11-1P61568 191 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 BTG1P62324 171 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 GDPGP1Q6ZNW5 385 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 ANKRD13BQ86YJ7 626 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 OR4D6Q8NGJ1 314 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 RAB1CQ92928 201 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 KCTD7Q96MP8 289 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 PPIAL4AQ9Y536 164 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms