RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 ZNF573Q86YE8 665 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 DEFB108BQ8NET1 73 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 OR5D14Q8NGL3 314 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 TSEN15Q8WW01 171 aaKnown RBP11.48□□□□□ -0.57
VRK3-219ENST00000600137 TMEM106AQ96A25 262 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 ZNF488Q96MN9 340 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 PKIBQ9C010 78 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 PPIL3Q9H2H8 161 aaKnown RBP11.48□□□□□ -0.57
VRK3-219ENST00000600137 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 SLC7A11Q9UPY5 501 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
VRK3-219ENST00000600137 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
VRK3-219ENST00000600137 WNK2Q9Y3S1 2297 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 TRAV8-7A0A075B6U6 113 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 hCG_1807616A0A1W2PRN6 198 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 OOEPA6NGQ2 149 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 J3QT63 122 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 SULT1B1O43704 296 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 CD5LO43866 347 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 OCM2P0CE71 109 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 IRF2P14316 349 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 CPEP16870 476 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 PRKACBP22694 351 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 ZFP36P26651 326 aaKnown RBP11.47□□□□□ -0.57
VRK3-219ENST00000600137 SEC61A1P61619 476 aaKnown RBP11.47□□□□□ -0.57
VRK3-219ENST00000600137 IL24Q13007 206 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 SSX1Q16384 188 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 UBE2UQ5VVX9 321 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 LIPKQ5VXJ0 399 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 ZNF773Q6PK81 442 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 TMEM91Q6ZNR0 172 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 PHC2Q8IXK0 858 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 BOLLQ8N9W6 283 aaKnown RBP11.47□□□□□ -0.57
VRK3-219ENST00000600137 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 SPSB1Q96BD6 273 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 DERL3Q96Q80 235 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 SPACA5Q96QH8 159 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 GAL3ST1Q99999 423 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 NRIP2Q9BQI9 281 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 HES4Q9HCC6 221 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 TAS2R4Q9NYW5 299 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 CTSZQ9UBR2 303 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
VRK3-219ENST00000600137 IGKV1-12A0A0C4DH73 117 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 A0A1W2PPK0 400 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 ISPDA4D126 451 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
VRK3-219ENST00000600137 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 IGKV1D-12P01611 117 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 MUC1P15941 1255 aaPredicted RBP11.46□□□□□ -0.57
VRK3-219ENST00000600137 GZMKP49863 264 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 RBP2P50120 134 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 ATP1B3P54709 279 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 MTCP1P56278 107 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 ZP1P60852 638 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 CNN3Q15417 329 aaKnown RBP11.46□□□□□ -0.57
VRK3-219ENST00000600137 ACSM3Q53FZ2 586 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 ATPAF1Q5TC12 328 aaPredicted RBP11.46□□□□□ -0.57
VRK3-219ENST00000600137 ZNF367Q7RTV3 350 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 MUC20Q8N307 709 aaPredicted RBP11.46□□□□□ -0.57
VRK3-219ENST00000600137 SPICQ8N5J4 248 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 OR52N4Q8NGI2 321 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 ZNF671Q8TAW3 534 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 BORCS8Q96FH0 119 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 LRCH1Q9Y2L9 728 aa11.46□□□□□ -0.57
VRK3-219ENST00000600137 NF1P21359 2839 aa11.46□□□□□ -0.58
VRK3-219ENST00000600137 HIVEP2P31629 2446 aa11.46□□□□□ -0.58
VRK3-219ENST00000600137 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 A0A1B0GW55 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 MAGEA13PA6NCF6 341 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 INMTO95050 263 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 GYPAP02724 150 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 TFF1P04155 84 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 ALDOBP05062 364 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 CD2P06729 351 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 HEXAP06865 529 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 HSMCR30P0CW71 290 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 CD37P11049 281 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 FSTP19883 344 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 TGFBR2P37173 567 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 RPS25P62851 125 aaKnown RBP11.45□□□□□ -0.58
VRK3-219ENST00000600137 PAX2Q02962 417 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 PDZK1IP1Q13113 114 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 KISS1Q15726 138 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 ARMCX4Q5H9R4 360 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 FAM27D1Q5T7N8 215 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 STUMQ69YW2 141 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms