RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LCN1P1Q5VSP4 162 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 PLCXD3Q63HM9 321 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 COMMD2Q86X83 199 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 CPOQ8IVL8 374 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 OR2T27Q8NH04 317 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 FOXRED1Q96CU9 486 aaPredicted RBP17.13■□□□□ 0.33
PNKP-212ENST00000599454 YIPF3Q9GZM5 350 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 C1orf21Q9H246 121 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 SERTAD4Q9NUC0 356 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 FAM206AQ9NX38 181 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 ENPP5Q9UJA9 477 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 PITPNC1Q9UKF7 332 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 TCF19Q9Y242 345 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 ARL2BPQ9Y2Y0 163 aa17.13■□□□□ 0.33
PNKP-212ENST00000599454 TBL2Q9Y4P3 447 aaKnown RBP17.13■□□□□ 0.33
PNKP-212ENST00000599454 NOS1APO75052 506 aaPredicted RBP17.12■□□□□ 0.33
PNKP-212ENST00000599454 DCTN3O75935 186 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 IGLV3-1P01715 115 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 PGA5P0DJD9 388 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 RPS7P62081 194 aaKnown RBP17.12■□□□□ 0.33
PNKP-212ENST00000599454 OXLD1Q5BKU9 147 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 ZNF684Q5T5D7 378 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 ZNF573Q86YE8 665 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 MROQ9BYG7 248 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 GPR84Q9NQS5 396 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 PIGLQ9Y2B2 252 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 POLDIP2Q9Y2S7 368 aa17.12■□□□□ 0.33
PNKP-212ENST00000599454 J3QT63 122 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 ZNF254O75437 659 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 NRASP01111 189 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 RAP2AP10114 183 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 CCL3L1P16619 93 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 FAHP16930 419 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 CNN3Q15417 329 aaKnown RBP17.11■□□□□ 0.33
PNKP-212ENST00000599454 LYG1Q8N1E2 194 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 RPS4Y2Q8TD47 263 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 TEX12Q9BXU0 123 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 PRSS22Q9GZN4 317 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 TAS2R1Q9NYW7 299 aa17.11■□□□□ 0.33
PNKP-212ENST00000599454 C17orf98A8MV24 154 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 DHRS3O75911 302 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 RBP4P02753 201 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 TK1P04183 234 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 CD28P10747 220 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 SLC2A5P22732 501 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 HAAOP46952 286 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 CDK5Q00535 292 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 ZNF273Q14593 569 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 ZNF829Q3KNS6 432 aaPredicted RBP17.1■□□□□ 0.33
PNKP-212ENST00000599454 LHFPL4Q7Z7J7 247 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 OR4M1Q8NGD0 313 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 OR51E1Q8TCB6 317 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 WIPF2Q8TF74 440 aaPredicted RBP17.1■□□□□ 0.33
PNKP-212ENST00000599454 SGCDQ92629 289 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 R3HDM4Q96D70 268 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 MALSU1Q96EH3 234 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 MMP28Q9H239 520 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 NUFIP1Q9UHK0 495 aaKnown RBP17.1■□□□□ 0.33
PNKP-212ENST00000599454 TMEM14AQ9Y6G1 99 aa17.1■□□□□ 0.33
PNKP-212ENST00000599454 A6NDX4 124 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 SYNGR1O43759 233 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 PEX14O75381 377 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 NXPH2O95156 264 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 CST1P01037 141 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 OSMP13725 252 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 ROM1Q03395 351 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 HABP2Q14520 560 aaPredicted RBP17.09■□□□□ 0.33
PNKP-212ENST00000599454 DMRTC1Q5HYR2 192 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 ZNF782Q6ZMW2 699 aaPredicted RBP17.09■□□□□ 0.33
PNKP-212ENST00000599454 ZNF679Q8IYX0 411 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 OR13D1Q8NGV5 346 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 ASB17Q8WXJ9 295 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 ZNF488Q96MN9 340 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 TEAD3Q99594 435 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 NRIP2Q9BQI9 281 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 ZNF556Q9HAH1 456 aa17.09■□□□□ 0.33
PNKP-212ENST00000599454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.09■□□□□ 0.33
PNKP-212ENST00000599454 ODF3BA8MYP8 253 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 B2RBV5 119 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 ALDOBP05062 364 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 ARG1P05089 322 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 DYNLT3P51808 116 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 RIDAP52758 137 aaKnown RBP17.08■□□□□ 0.32
PNKP-212ENST00000599454 DLX6P56179 175 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 MS4A2Q01362 244 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 CLVS2Q5SYC1 327 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 CCBE1Q6UXH8 406 aaPredicted RBP17.08■□□□□ 0.32
PNKP-212ENST00000599454 BBS1Q8NFJ9 593 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 OR11H6Q8NGC7 330 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 PHF21AQ96BD5 680 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 LRGUKQ96M69 825 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 OR8B4Q96RC9 309 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 CITED2Q99967 270 aaPredicted RBP17.08■□□□□ 0.32
PNKP-212ENST00000599454 CHID1Q9BWS9 393 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 WNT10AQ9GZT5 417 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 HES4Q9HCC6 221 aa17.08■□□□□ 0.32
PNKP-212ENST00000599454 AURKAIP1Q9NWT8 199 aaPredicted RBP17.08■□□□□ 0.32
PNKP-212ENST00000599454 ADARB2-AS1A8MUL3 147 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms