RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 PLEKHG7Q6ZR37 379 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 SSX6Q7RTT6 188 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 SLC35F2Q8IXU6 374 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 PNKDQ8N490 385 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 OR5D13Q8NGL4 314 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 OR4C13Q8NGP0 309 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 ANGPTL6Q8NI99 470 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 PPP1R35Q8TAP8 253 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 PYDC1Q8WXC3 89 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 ASB17Q8WXJ9 295 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 CENPNQ96H22 339 aaPredicted RBP10.2□□□□□ -0.78
TRIM28-212ENST00000597995 RNF170Q96K19 258 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 GAFA1Q96PS6 74 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 SSX3Q99909 188 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 OSBPL10Q9BXB5 764 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 GABARAPL3Q9BY60 117 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 MROQ9BYG7 248 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 WDR13Q9H1Z4 485 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 RAB18Q9NP72 206 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 GPR84Q9NQS5 396 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 NUFIP1Q9UHK0 495 aaKnown RBP10.2□□□□□ -0.78
TRIM28-212ENST00000597995 MRM2Q9UI43 246 aaKnown RBP10.2□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF391Q9UJN7 358 aa10.2□□□□□ -0.78
TRIM28-212ENST00000597995 A0A1W2PQ09 198 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 SAC3D1A6NKF1 404 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 H3BNX3 289 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF254O75437 659 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 RHBDL1O75783 438 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 ALX3O95076 343 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 TTRP02766 147 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 FCGR1AP12314 374 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 FAM189A2Q15884 450 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 HCP5Q6MZN7 132 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 CRIP3Q6Q6R5 217 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 Q6ZPA2 131 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 OR51G2Q8NGK0 314 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 OR2T6Q8NHC8 308 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 OR51E1Q8TCB6 317 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 PRRG3Q9BZD7 231 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 SNTG1Q9NSN8 517 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 CLN6Q9NWW5 311 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 IKZF2Q9UKS7 526 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 TMEM14AQ9Y6G1 99 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
TRIM28-212ENST00000597995 TRBV23-1A0A0A0MS06 115 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 A0A1B0GTI1 187 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 OR2AT4A6NND4 320 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 E9PQ18 207 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 PIN1P1O15428 100 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 AKR7A2O43488 359 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 APOL3O95236 402 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 FAHP16930 419 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 NDUFB7P17568 137 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 MAP2K3P46734 347 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 GPM6AP51674 278 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 RIDAP52758 137 aaKnown RBP10.18□□□□□ -0.78
TRIM28-212ENST00000597995 GMFBP60983 142 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 ACTR3P61158 418 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
TRIM28-212ENST00000597995 LRRC75BQ2VPJ9 315 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 CEP78Q5JTW2 689 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF684Q5T5D7 378 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 ZDHHC23Q8IYP9 409 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 KLHDC1Q8N7A1 406 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 ITFG2Q969R8 447 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 AJUBAQ96IF1 538 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 H2AFY2Q9P0M6 372 aaPredicted RBP10.18□□□□□ -0.78
TRIM28-212ENST00000597995 NLKQ9UBE8 527 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 FOXJ3Q9UPW0 622 aa10.18□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF732B4DXR9 585 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 H0YAE9 185 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 XPNPEP2O43895 674 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 CIB2O75838 187 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 GLRA1P23415 457 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 HTR1FP30939 366 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 EMX1Q04741 257 aaPredicted RBP10.17□□□□□ -0.78
TRIM28-212ENST00000597995 LY6EQ16553 131 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF829Q3KNS6 432 aaPredicted RBP10.17□□□□□ -0.78
TRIM28-212ENST00000597995 CEACAM21Q3KPI0 293 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 TMEM42Q69YG0 159 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 Q6ZSR3 168 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 KCTD8Q6ZWB6 473 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 GID4Q8IVV7 300 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 ELMOD2Q8IZ81 293 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 OR14K1Q8NGZ2 314 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 FAM81AQ8TBF8 368 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 C17orf50Q8WW18 174 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
TRIM28-212ENST00000597995 EME1Q96AY2 570 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 MNTQ99583 582 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 TBX5Q99593 518 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 RIBC2Q9H4K1 309 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 WARS2Q9UGM6 360 aaKnown RBP10.17□□□□□ -0.78
TRIM28-212ENST00000597995 SLC22A13Q9Y226 551 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 PIGLQ9Y2B2 252 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 R4GMQ9 66 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms