RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TMIGD2Q96BF3 282 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 ANKRD60Q9BZ19 345 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CHST5Q9GZS9 411 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CCDC90BQ9GZT6 254 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 MMP26Q9NRE1 261 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 CLN8Q9UBY8 286 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 OR5V1Q9UGF6 321 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 ERGIC3Q9Y282 383 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 LRCH1Q9Y2L9 728 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
LIG1-211ENST00000596457 A0A0G2JMP0 313 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 A0A0X1KG70 313 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 TRAPPC2LH3BP13 241 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 J3QT63 122 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 TMPRSS2O15393 492 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 NDUFA2O43678 99 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 HCKP08631 526 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
LIG1-211ENST00000596457 AZGP1P25311 298 aaKnown RBP9.24□□□□□ -0.93
LIG1-211ENST00000596457 POU3F4P49335 361 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 MTCP1P56278 107 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 IKZF1Q13422 519 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 CCDC58Q4VC31 144 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 CALHM1Q8IU99 346 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 NANOGP1Q8N7R0 232 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 OR4M2Q8NGB6 313 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 HAVCR2Q8TDQ0 301 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 ST8SIA4Q92187 359 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 SLAMF9Q96A28 289 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 C10orf35Q96D05 121 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 SPACA5Q96QH8 159 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 ZCCHC4Q9H5U6 513 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 C7orf69Q9H7B7 122 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 FKBP14Q9NWM8 211 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 NLKQ9UBE8 527 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 CTSZQ9UBR2 303 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 RAB26Q9ULW5 256 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 PCDHGB5Q9Y5G0 923 aa9.24□□□□□ -0.93
LIG1-211ENST00000596457 TLN2Q9Y4G6 2542 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 IGKV1-27A0A075B6S5 117 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 LOC105371242A0A075B767 164 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 IGKV1-9A0A0C4DH69 117 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 A0A1B0GW55 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 NKX6-3A6NJ46 265 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 OGG1O15527 345 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 NXPH2O95156 264 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 FSTL3O95633 263 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 FAM157CP0CG43 387 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L2P0CJ85 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L3P0CJ86 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L4P0CJ87 422 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L5P0CJ88 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L6P0CJ89 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L7P0CJ90 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 CALCBP10092 127 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 SRD5A1P18405 259 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 ADRA2CP18825 462 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 PRKACBP22694 351 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 EEF1B2P24534 225 aaKnown RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 CFHR2P36980 270 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 RBP2P50120 134 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 WNT4P56705 351 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 MED22Q15528 200 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 WDR25Q64LD2 544 aaPredicted RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4L9Q6RFH8 374 aaPredicted RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 SLC36A1Q7Z2H8 476 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 SATL1Q86VE3 508 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 SERPINA12Q8IW75 414 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 FGFRL1Q8N441 504 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 FAM216BQ8N7L0 139 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 OR13C5Q8NGS8 318 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 GPR148Q8TDV2 347 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 RGP1Q92546 391 aaPredicted RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 ORAI1Q96D31 301 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 OPALINQ96PE5 141 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 PAK1IP1Q9NWT1 392 aaPredicted RBP9.23□□□□□ -0.93
LIG1-211ENST00000596457 DUX4Q9UBX2 424 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 OR14J1Q9UGF5 321 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 POLDIP2Q9Y2S7 368 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 ZNF281Q9Y2X9 895 aa9.23□□□□□ -0.93
LIG1-211ENST00000596457 OR2AT4A6NND4 320 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 DVL1O14640 695 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 SPRY1O43609 319 aaPredicted RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 RGS10O43665 173 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 NDUFB3O43676 98 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 AVPP01185 164 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 MT-ND2P03891 347 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 PGA5P0DJD9 388 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 SELLP14151 372 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 CELP19835 753 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 CAPZA1P52907 286 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 SNU13P55769 128 aaKnown RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 TAS2R43P59537 309 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 DMKNQ6E0U4 476 aaPredicted RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 BTNL3Q6UXE8 466 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms