RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 J3QRE1 110 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 SLC1A7O00341 560 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ISG15P05161 165 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 SFTPBP07988 381 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 RNASE1P07998 156 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 PGA5P0DJD9 388 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 CCR9P51686 369 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 GUCA2AQ02747 115 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ZNF91Q05481 1191 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 IL24Q13007 206 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 BLMHQ13867 455 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 METAP1DQ6UB28 335 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ENTHD1Q8IYW4 607 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ZNF555Q8NEP9 628 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 H1FXQ92522 213 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 UBE2FQ969M7 185 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ZDHHC16Q969W1 377 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 SEH1LQ96EE3 360 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 SDSLQ96GA7 329 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ZNF48Q96MX3 618 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 PRDM13Q9H4Q3 707 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 SMPD3Q9NY59 655 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ONECUT1Q9UBC0 465 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 ZNF222Q9UK12 451 aa14.65□□□□□ -0.06
SHKBP1-204ENST00000594862 IGKV1D-17A0A075B6S4 117 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 IGHV1-69DA0A0B4J2H0 117 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1B0GW55 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1W2PPH5 198 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 FCN3O75636 299 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 NXPH2O95156 264 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 BAG2O95816 211 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 IGHV1-69P01742 117 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 HTR1AP08908 422 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L2P0CJ85 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L3P0CJ86 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L4P0CJ87 422 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L5P0CJ88 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L6P0CJ89 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L7P0CJ90 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DBTP11182 482 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 PSG2P11465 335 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 NDUFB7P17568 137 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 GABRB1P18505 474 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 AMY2BP19961 511 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 GABRA2P47869 451 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 FUT6P51993 359 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 ARF6P62330 175 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 RAB40BQ12829 278 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DGUOKQ16854 277 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 ODF4Q2M2E3 257 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4L9Q6RFH8 374 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 BRD3OSQ6XYD6 125 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 ACP7Q6ZNF0 438 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 C1orf122Q6ZSJ8 110 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 SYS1Q8N2H4 156 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 PRSS35Q8N3Z0 413 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNF561Q8N587 486 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 TMEM86BQ8N661 226 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 OR2G2Q8NGZ5 317 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 RHOXF1Q8NHV9 184 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 NRIP2Q9BQI9 281 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 FAM118AQ9NWS6 357 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 DUX4Q9UBX2 424 aa14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 CAB39Q9Y376 341 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 RPL36Q9Y3U8 105 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-204ENST00000594862 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1W2PQ09 198 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 M0R1W7 72 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 FOXL1Q12952 345 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 KLHL22Q53GT1 634 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 NCR3LG1Q68D85 454 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 DNAAF1Q8NEP3 725 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 TMEM185AQ8NFB2 350 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 NPRL2Q8WTW4 380 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 LGALS12Q96DT0 336 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 BORCS8Q96FH0 119 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 SLC29A1Q99808 456 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 NEK6Q9HC98 313 aa14.63□□□□□ -0.07
SHKBP1-204ENST00000594862 FAM230AA0A1W2PPH8 454 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 IRGMA1A4Y4 181 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 SYNGR1O43759 233 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 CYB5AP00167 134 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 IGHA1P01876 353 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 HKR1P10072 659 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNF20P17024 532 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 PRKACBP22694 351 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 EEF1B2P24534 225 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 KIR3DL2P43630 455 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 ELF3P78545 371 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 GALEQ14376 348 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 SLC9A3R2Q15599 337 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 LPCAT4Q643R3 524 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 UTS2BQ765I0 119 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 VMO1Q7Z5L0 202 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 Q8IYB0 196 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 PACRGLQ8N7B6 248 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 C3orf56Q8N813 242 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 TBC1D15Q8TC07 691 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 LHX4Q969G2 390 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 C4orf36Q96KX1 117 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms