RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 PLATP00750 562 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 CHRM2P08172 466 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 TMEM225BP0DP42 221 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 ZNF250P15622 560 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 BSPH1Q075Z2 132 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 TFF3Q07654 80 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 PDZK1IP1Q13113 114 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 KLF9Q13886 244 aaPredicted RBP12.97□□□□□ -0.33
VRK3-207ENST00000594092 MOGAT2Q3SYC2 334 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 CALHM1Q8IU99 346 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
VRK3-207ENST00000594092 OR8G5Q8NG78 346 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 TMEM171Q8WVE6 324 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 RNF170Q96K19 258 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
VRK3-207ENST00000594092 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
VRK3-207ENST00000594092 MEIOCA2RUB1 952 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 B8ZZF3 427 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 RAB27BO00194 218 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 SULT1C2O00338 296 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 ABCD4O14678 606 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 ANGPTL7O43827 346 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 TIMM8AO60220 97 aaPredicted RBP12.96□□□□□ -0.33
VRK3-207ENST00000594092 RBBP9O75884 186 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 RPS23P62266 143 aaKnown RBP12.96□□□□□ -0.33
VRK3-207ENST00000594092 SORDQ00796 357 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 LPAR5Q9H1C0 372 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 BANF2Q9H503 90 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.33
VRK3-207ENST00000594092 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
VRK3-207ENST00000594092 IGKV1-12A0A0C4DH73 117 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 OR5B21A6NL26 309 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 H7C417 338 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 ZG16O60844 167 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 IGKV1D-12P01611 117 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 SERPINA2P20848 420 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 VEGFCP49767 419 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 GNG3P63215 75 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 C11orf91Q3C1V1 193 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 CHST4Q8NCG5 386 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 NUP37Q8NFH4 326 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 PXT1Q8NFP0 134 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 OR10R2Q8NGX6 335 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 ITLN2Q8WWU7 325 aaPredicted RBP12.95□□□□□ -0.34
VRK3-207ENST00000594092 ADAT1Q9BUB4 502 aaKnown RBP12.95□□□□□ -0.34
VRK3-207ENST00000594092 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 MMP28Q9H239 520 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 NLKQ9UBE8 527 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 ANKRD20A5PA0PJZ0 165 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 IGHV3-13P01766 116 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 HAAOP46952 286 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
VRK3-207ENST00000594092 Q6ZR03 302 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 ZNF611Q8N823 705 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
VRK3-207ENST00000594092 OR56B1Q8NGI3 324 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 MICU1Q9BPX6 476 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 NICN1Q9BSH3 213 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 RTL8AQ9BWD3 113 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
VRK3-207ENST00000594092 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
VRK3-207ENST00000594092 PLCE1Q9P212 2302 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 A0A0A6YYD4 124 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 H0YL77 283 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 MLNRO43193 412 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 LPLP06858 475 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 CSF1P09603 554 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 MGMTP16455 207 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 AGAP20933 346 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 SLC6A1P30531 599 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
VRK3-207ENST00000594092 GUCA2AQ02747 115 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 RSU1Q15404 277 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 OR8G1Q15617 311 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 ZNF260Q3ZCT1 412 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 NCMAPQ5T1S8 102 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 Q6ZTK2 550 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 SLC25A26Q70HW3 274 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 GPX8Q8TED1 209 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms