RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 EFNB1P98172 346 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 TAF9Q16594 264 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 MIDNQ504T8 468 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 LRRC10Q5BKY1 277 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 PLEKHG7Q6ZR37 379 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 CMTM4Q8IZR5 234 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 FAM216BQ8N7L0 139 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 OR10H4Q8NGA5 316 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 OR8J1Q8NGP2 316 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 SEH1LQ96EE3 360 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 HRASLS5Q96KN8 279 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 APOL4Q9BPW4 351 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 RTL8AQ9BWD3 113 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 PAPOLGQ9BWT3 736 aaKnown RBP8.53□□□□□ -1.04
VPS4B-207ENST00000591519 YIPF3Q9GZM5 350 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 MMP27Q9H306 513 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 ADGRL4Q9HBW9 690 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 FAM96BQ9Y3D0 163 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 LRP12Q9Y561 859 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 TGP01266 2768 aa8.53□□□□□ -1.04
VPS4B-207ENST00000591519 RNASEK-C17orf49H0YIS7 233 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 ACAA1P09110 424 aaPredicted RBP8.52□□□□□ -1.05
VPS4B-207ENST00000591519 HTR1FP30939 366 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 TGFBR2P37173 567 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 UBE2E1P51965 193 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 CAV3P56539 151 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 CXCR4P61073 352 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 ACSM1Q08AH1 577 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 PRDX4Q13162 271 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 Q6ZSV7 163 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 SSX6Q7RTT6 188 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 PDZD9Q8IXQ8 264 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 ANGPTL6Q8NI99 470 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 CYGBQ8WWM9 190 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 RNF170Q96K19 258 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 LYZL4Q96KX0 146 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 FGF23Q9GZV9 251 aaPredicted RBP8.52□□□□□ -1.05
VPS4B-207ENST00000591519 WDR13Q9H1Z4 485 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 NIPAL2Q9H841 368 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 ZNRD1Q9P1U0 126 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 WARS2Q9UGM6 360 aaKnown RBP8.52□□□□□ -1.05
VPS4B-207ENST00000591519 NOTCH1P46531 2555 aa8.52□□□□□ -1.05
VPS4B-207ENST00000591519 LOC100130705A0A1B0GUX0 176 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ACOD1A6NK06 481 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ZNF850A8MQ14 1090 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 M0R1W7 72 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 NPFFO15130 113 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 RPP14O95059 124 aaKnown RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 CLIC3O95833 236 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 EEF1B2P24534 225 aaKnown RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 MFGE8Q08431 387 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 IKZF1Q13422 519 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 DGUOKQ16854 277 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 KCTD18Q6PI47 426 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 DEGS2Q6QHC5 323 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ZNF322Q6U7Q0 402 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 Q6ZS46 218 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 COMMD2Q86X83 199 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ENTHD1Q8IYW4 607 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ZNF555Q8NEP9 628 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 OR8B12Q8NGG6 310 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 HPSE2Q8WWQ2 592 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 PIGCQ92535 297 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 RPL3LQ92901 407 aaKnown RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 PPP1R14AQ96A00 147 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 RNFT2Q96EX2 444 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 GAFA1Q96PS6 74 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 OR8B4Q96RC9 309 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 MROQ9BYG7 248 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 OR51I2Q9H344 312 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 METTL8Q9H825 291 aaKnown RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 SIRT7Q9NRC8 400 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 FAM118AQ9NWS6 357 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 CLN6Q9NWW5 311 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 SMPD3Q9NY59 655 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 ONECUT1Q9UBC0 465 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 DNAJB11Q9UBS4 358 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
VPS4B-207ENST00000591519 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 TMEM14AQ9Y6G1 99 aa8.51□□□□□ -1.05
VPS4B-207ENST00000591519 A0A0U1RQV5 110 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 ZNF816-ZNF321PA0A0X1KG74 233 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 TMEM269A0A1B0GVZ9 245 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 OR2AT4A6NND4 320 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 H3BSH0 61 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 AKR7A2O43488 359 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 SELLP14151 372 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 ATP6V1B1P15313 513 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 RIDAP52758 137 aaKnown RBP8.5□□□□□ -1.05
VPS4B-207ENST00000591519 SNRPGP62308 76 aaKnown RBP8.5□□□□□ -1.05
VPS4B-207ENST00000591519 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 CEACAM21Q3KPI0 293 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 NCR3LG1Q68D85 454 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
VPS4B-207ENST00000591519 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms