RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	MAS1	P04201	325 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	EIF2S3	P41091	472 aa	Known RBP	13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	FOXG1	P55316	489 aa	Predicted RBP	13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	PEA15	Q15121	130 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	FAM74A1	Q5RGS3	127 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	GLT8D1	Q68CQ7	371 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	IL34	Q6ZMJ4	242 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	NAA40	Q86UY6	237 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	CBLN2	Q8IUK8	224 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	HAVCR1	Q96D42	359 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	SLITRK2	Q9H156	845 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	DCAF16	Q9NXF7	216 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	PLEK2	Q9NYT0	353 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	MIOX	Q9UGB7	285 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	FOXJ3	Q9UPW0	622 aa		13.43	□□□□□ -0.26
DDX39A-209	ENST00000589318	SYNGR3	O43761	229 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	PATE4	P0C8F1	98 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	CRYGS	P22914	178 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	NRN1L	Q496H8	165 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	FAM76B	Q5HYJ3	339 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	MCEMP1	Q8IX19	187 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF561	Q8N587	486 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF283	Q8N7M2	679 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR13C3	Q8NGS6	347 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR51E1	Q8TCB6	317 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	SOX7	Q9BT81	388 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	GP6	Q9HCN6	339 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	TNFSF18	Q9UNG2	199 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	DMRT1	Q9Y5R6	373 aa		13.42	□□□□□ -0.26
DDX39A-209	ENST00000589318	RBBP9	O75884	186 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	IGLV3-1	P01715	115 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	CD2	P06729	351 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	DBH	P09172	617 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF32	P17041	273 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	CFP	P27918	469 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	PMEL	P40967	661 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	RAB35	Q15286	201 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ACOT7L	Q6ZUV0	252 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF627	Q7L945	461 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	IZUMO1	Q8IYV9	350 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	APH1A	Q96BI3	265 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	SLC25A38	Q96DW6	304 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	DOCK7	Q96N67	2140 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	SLC17A5	Q9NRA2	495 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	SMCO4	Q9NRQ5	59 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	TAS2R4	Q9NYW5	299 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	COMMD9	Q9P000	198 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	DKK4	Q9UBT3	224 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	KLK11	Q9UBX7	282 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	LHX6	Q9UPM6	363 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR6C6	A6NF89	314 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	TTLL8	A6PVC2	850 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318		K7ENP7	123 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	MMP7	P09237	267 aa	Predicted RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	CD37	P11049	281 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	CCL1	P22362	96 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	BDKRB2	P30411	391 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ARHGDIB	P52566	201 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	CLDN12	P56749	244 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	SNRPE	P62304	92 aa	Known RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ARF1	P84077	181 aa	Known RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	HABP2	Q14520	560 aa	Predicted RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	KRTAP27-1	Q3LI81	207 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF774	Q6NX45	483 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	MTFR2	Q6P444	385 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	INO80C	Q6PI98	192 aa	Predicted RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	FAM57B	Q71RH2	274 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	SLC16A13	Q7RTY0	426 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	MUC20	Q8N307	709 aa	Predicted RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR51A2	Q8NGJ7	313 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	TCTEX1D2	Q8WW35	142 aa		13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	PAPOLG	Q9BWT3	736 aa	Known RBP	13.41	□□□□□ -0.26
DDX39A-209	ENST00000589318	GTF3C1	Q12789	2109 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	TRAV14DV4	A0A0A6YYC5	116 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	ZNF587B	E7ETH6	402 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318		F5H5K5	113 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318		H7C417	338 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	SYT7	O43581	403 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	ANXA2	P07355	339 aa	Known RBP	13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	FCGR2A	P12318	317 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	ADCYAP1	P18509	176 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	LUM	P51884	338 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	PSG4	Q00888	419 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	HGFAC	Q04756	655 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	RAB12	Q6IQ22	244 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	SLC16A14	Q7RTX9	510 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR52B4	Q8NGK2	314 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR1S2	Q8NGQ3	325 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR1J2	Q8NGS2	313 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	STOML3	Q8TAV4	291 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	C2CD4C	Q8TF44	421 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	ADAT3	Q96EY9	351 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	WDR89	Q96FK6	387 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	OR2H1	Q9GZK4	316 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	WNT5B	Q9H1J7	359 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	MMP26	Q9NRE1	261 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	MTFP1	Q9UDX5	166 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms