RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 CSNK2A3Q8NEV1 391 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 OR51S1Q8NGJ8 323 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 ARHGAP5-AS1Q96IT6 56 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 PAPOLGQ9BWT3 736 aaKnown RBP7.56□□□□□ -1.2
SMAD4-206ENST00000588860 TM2D1Q9BX74 207 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 TINAGL1Q9GZM7 467 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-206ENST00000588860 GHITMQ9H3K2 345 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 PRORYQ9H606 182 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 OPA3Q9H6K4 179 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 CDH20Q9HBT6 801 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 ING3Q9NXR8 418 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-206ENST00000588860 POU2F3Q9UKI9 436 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 PROCRQ9UNN8 238 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 TP53TG5Q9Y2B4 290 aa7.56□□□□□ -1.2
SMAD4-206ENST00000588860 COL6A6A6NMZ7 2263 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 A0A1B0GUH1 482 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MBD3L4A6NDZ8 208 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MBD3L3A6NE82 208 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MBD3L5A6NJ08 208 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 DISC1C4P0D8 188 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MFNGO00587 321 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 SSNA1O43805 119 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ICMTO60725 284 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 PRAF2O60831 178 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CST4P01036 141 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CSTBP04080 98 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 AMY2AP04746 511 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 RLN1P04808 185 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CSN2P05814 226 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MELTFP08582 738 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF14P17017 642 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 COX5AP20674 150 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CPT2P23786 658 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 GABRR1P24046 479 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 BLVRBP30043 206 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 IDH3GP51553 393 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MEF2DQ14814 521 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 RBMS2Q15434 407 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CD276Q5ZPR3 534 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MYPOPQ86VE0 399 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CXorf67Q86X51 503 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CCDC36Q8IYA8 594 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ZDHHC23Q8IYP9 409 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 TCTE3Q8IZS6 198 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 FAM89BQ8N5H3 189 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 GVQW1Q8N7I0 195 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 C1orf162Q8NEQ5 155 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 BEST4Q8NFU0 473 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 OR4S1Q8NGB4 309 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 MBD3L2Q8NHZ7 208 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF75AQ96N20 296 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 SEC22CQ9BRL7 303 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 OPN3Q9H1Y3 402 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 CRIM1Q9NZV1 1036 aa7.55□□□□□ -1.2
SMAD4-206ENST00000588860 EIF3KQ9UBQ5 218 aaKnown RBP7.55□□□□□ -1.2
SMAD4-206ENST00000588860 PRR14LQ5THK1 2151 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PQLC2LA1A4F0 135 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 ANKRD30BLA7E2S9 258 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 CD300LBA8K4G0 201 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 FOXI3A8MTJ6 420 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-206ENST00000588860 K7ENP7 123 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 RRP8O43159 456 aaKnown RBP7.54□□□□□ -1.2
SMAD4-206ENST00000588860 WDR1O75083 606 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 TNFSF13O75888 250 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 AGFG2O95081 481 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 CD74P04233 296 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PTGER4P35408 488 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 CBX5P45973 191 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 TMEM50BP56557 158 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PDZK1IP1Q13113 114 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 MAB21L1Q13394 359 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 SCGB2B2Q4G0G5 96 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 KRTCAP3Q53RY4 240 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 RNASE10Q5GAN6 216 aaKnown RBP7.54□□□□□ -1.2
SMAD4-206ENST00000588860 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 SPATA46Q5T0L3 261 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 RTL6Q6ICC9 239 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 OR52W1Q6IF63 320 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 IDO2Q6ZQW0 420 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 BHLHA15Q7RTS1 189 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-206ENST00000588860 FTMTQ8N4E7 242 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 EXTL1Q92935 676 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms