RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, human

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC130-208	ENST00000588071	TLNRD1	Q9H1K6	362 aa		11.94	□□□□□ -0.5
CCDC130-208	ENST00000588071	STEAP1	Q9UHE8	339 aa		11.94	□□□□□ -0.5
CCDC130-208	ENST00000588071	DAPK2	Q9UIK4	370 aa		11.94	□□□□□ -0.5
CCDC130-208	ENST00000588071	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.94	□□□□□ -0.5
CCDC130-208	ENST00000588071	TANC2	Q9HCD6	1990 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071		A0A0G2JK05	382 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	IGHV1-69-2	A0A0G2JMI3	117 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	TRAPPC2L	H3BP13	241 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	AIP	O00170	330 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	SYNGR1	O43759	233 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	ANGPTL7	O43827	346 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	RHBDL1	O75783	438 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	CD37	P11049	281 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	SLC2A2	P11168	524 aa	Predicted RBP	11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	DAO	P14920	347 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	DNASE1	P24855	282 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	COL8A2	P25067	703 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	PMEL	P40967	661 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	EFNA4	P52798	201 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	IL24	Q13007	206 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	P2RY14	Q15391	338 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	C1orf100	Q5SVJ3	147 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	CRIP3	Q6Q6R5	217 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	WDR82	Q6UXN9	313 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	NR2C2AP	Q86WQ0	139 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	LYPD6	Q86Y78	171 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	BOLL	Q8N9W6	283 aa	Known RBP	11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	LRRC29	Q8WV35	223 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	IGFBPL1	Q8WX77	278 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	RDH5	Q92781	318 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	HPS1	Q92902	700 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	SLAMF9	Q96A28	289 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	METTL9	Q9H1A3	318 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	SMURF1	Q9HCE7	757 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	PCDHB16	Q9NRJ7	776 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	RNF7	Q9UBF6	113 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	TENM4	Q6N022	2769 aa		11.93	□□□□□ -0.5
CCDC130-208	ENST00000588071	AKAP6	Q13023	2319 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	HTR3B	O95264	441 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	CSTB	P04080	98 aa	Known RBP	11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	ARSB	P15848	533 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	MPZ	P25189	248 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	ATP5J2	P56134	94 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	CLDN12	P56749	244 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	GMFB	P60983	142 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	GPR176	Q14439	515 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	C1QL2	Q7Z5L3	287 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	SAXO1	Q8IYX7	474 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	C1orf87	Q8N0U7	546 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	BATF2	Q8N1L9	274 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	PXT1	Q8NFP0	134 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	OR10Z1	Q8NGY1	313 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071		Q8TCH9	128 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	DLL4	Q9NR61	685 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	TMEM106B	Q9NUM4	274 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	MTCH1	Q9NZJ7	389 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	GHRL	Q9UBU3	117 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	USF3	Q68DE3	2245 aa		11.92	□□□□□ -0.5
CCDC130-208	ENST00000588071	LYNX1	G3V0Z9	82 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	IFNL4	K9M1U5	179 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	AKR7A2	O43488	359 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	NDUFS7	O75251	213 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ZNF780A	O75290	641 aa	Predicted RBP	11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	LY6H	O94772	140 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	CYB5R3	P00387	301 aa	Predicted RBP	11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	UBB	P0CG47	229 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	LYNX1	P0DP58	116 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ZNF182	P17025	639 aa	Predicted RBP	11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	BCL3	P20749	454 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	SERPINA2	P20848	420 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	GLRA1	P23415	457 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	CAPZA1	P52907	286 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	MRPS11	P82912	194 aa	Known RBP	11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	CARTPT	Q16568	116 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	DGUOK	Q16854	277 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ZNF181	Q2M3W8	571 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	C2orf76	Q3KRA6	126 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	SLC22A6	Q4U2R8	563 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	FAM166A	Q6J272	317 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ASCL4	Q6XD76	172 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	OR51D1	Q8NGF3	324 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	TBC1D15	Q8TC07	691 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	DYNC2LI1	Q8TCX1	351 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	AP3S1	Q92572	193 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	YIPF5	Q969M3	257 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	FAM3D	Q96BQ1	224 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	CEP19	Q96LK0	163 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ZNF488	Q96MN9	340 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	DCUN1D5	Q9BTE7	237 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	ZNF701	Q9NV72	531 aa	Predicted RBP	11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071	CACNG2	Q9Y698	323 aa		11.91	□□□□□ -0.5
CCDC130-208	ENST00000588071		A0A0B4J203	849 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	IGKV1-12	A0A0C4DH73	117 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	SSX4	O60224	188 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	TMEM127	O75204	238 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	KDM4B	O94953	1096 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	NXPH2	O95156	264 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	BPNT1	O95861	308 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	IGKV1D-12	P01611	117 aa		11.9	□□□□□ -0.5
CCDC130-208	ENST00000588071	ACAA1	P09110	424 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms