RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ASCL4Q6XD76 172 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C1QL2Q7Z5L3 287 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TMEM200AQ86VY9 491 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZSCAN4Q8NAM6 433 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SCCPDHQ8NBX0 429 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR6M1Q8NGM8 313 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ITLN1Q8WWA0 313 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PKIBQ9C010 78 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PLGRKTQ9HBL7 147 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CCDC59Q9P031 241 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 STEAP1Q9UHE8 339 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 DAPK2Q9UIK4 370 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 NAV3Q8IVL0 2385 aa13.83□□□□□ -0.19
CDK5RAP3-228ENST00000583363 IGHV3-64DA0A0J9YX35 117 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TMEM225BP0DP42 221 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MPZP25189 248 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SOX6P35712 828 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PMELP40967 661 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 GATA4P43694 442 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MPPED2Q15777 294 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 DGUOKQ16854 277 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PRAMEF6Q5VXH4 476 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PNLDC1Q8NA58 520 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PXT1Q8NFP0 134 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR5D18Q8NGL1 313 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TNFAIP8L1Q8WVP5 186 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 IGFBPL1Q8WX77 278 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 AQP3Q92482 292 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 VRK1Q99986 396 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SLIRPQ9GZT3 109 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 EGLN1Q9GZT9 426 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 DECR2Q9NUI1 292 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ING4Q9UNL4 249 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 DSCAMO60469 2012 aa13.83□□□□□ -0.2
CDK5RAP3-228ENST00000583363 HRNRQ86YZ3 2850 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 J3QT63 122 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OVOL3O00110 214 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CDIPTO14735 213 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SYNGR1O43759 233 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TNFRSF1AP19438 455 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 RANBP1P43487 201 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 POU3F4P49335 361 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CLDN12P56749 244 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CCL8P80075 99 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 IL24Q13007 206 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 P2RY14Q15391 338 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 C2orf76Q3KRA6 126 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 GLIPR1L1Q6UWM5 242 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SLC25A26Q70HW3 274 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MKXQ8IYA7 352 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SAXO1Q8IYX7 474 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR51F2Q8NH61 342 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ZNF671Q8TAW3 534 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NRGNQ92686 78 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ERGIC1Q969X5 290 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CACNG6Q9BXT2 260 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 RAB1BQ9H0U4 201 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ABRACLQ9P1F3 81 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 GHRLQ9UBU3 117 aa13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MRPS28Q9Y2Q9 187 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PRRC2AP48634 2157 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 A0A0B4J203 849 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 IGKV1-12A0A0C4DH73 117 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ANGPTL7O43827 346 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 RHBDL1O75783 438 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PLATP00750 562 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 IGKV1D-12P01611 117 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ACAA1P09110 424 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CALCBP10092 127 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 DYNC1I2Q13409 638 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 AWAT2Q6E213 333 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ZNF826PQ6ZT77 177 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MOGAT3Q86VF5 341 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TBC1D15Q8TC07 691 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ACOT12Q8WYK0 555 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 FAM3DQ96BQ1 224 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 C1orf147Q96MC9 270 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MRI1Q9BV20 369 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 FN3KRPQ9HA64 309 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 LIN7BQ9HAP6 207 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 GCM1Q9NP62 436 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 UFSP2Q9NUQ7 469 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 C1orf123Q9NWV4 160 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MTCH1Q9NZJ7 389 aa13.81□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CHD3Q12873 2000 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 A0A075B6Q4 140 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 A6NLC8 198 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 H7C417 338 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 LDLRAD4O15165 306 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TPD52L2O43399 206 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 BPNT1O95861 308 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PAHP00439 452 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 HPXP02790 462 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 UBBP0CG47 229 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms