RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C17orf78Q8N4C9 275 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 PAQR4Q8N4S7 273 aaPredicted RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 OR10K1Q8NGX5 313 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 OR51F2Q8NH61 342 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 CHAC2Q8WUX2 184 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 CCDC107Q8WV48 283 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 SEH1LQ96EE3 360 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 CCDC120Q96HB5 630 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RNF170Q96K19 258 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 VKORC1Q9BQB6 163 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 REPIN1Q9BWE0 567 aaKnown RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 C1QTNF6Q9BXI9 259 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 OR10A4Q9H209 315 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 NOX3Q9HBY0 568 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 TUBG2Q9NRH3 451 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 MEMO1Q9Y316 297 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RHBDD3Q9Y3P4 386 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 MPC1Q9Y5U8 109 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 KLF2Q9Y5W3 355 aaPredicted RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 HECTD1Q9ULT8 2610 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 DOPEY1Q5JWR5 2465 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 A0A1W2PR80 420 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 UBE2QL1A1L167 161 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 CD300LBA8K4G0 201 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 PRSS44E7EML9 344 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 TRAPPC2LH3BP13 241 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 RAB27BO00194 218 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 SPRY1O43609 319 aaPredicted RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 PEX14O75381 377 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 CST4P01036 141 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 AMY2AP04746 511 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 FCER2P06734 321 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 NAT2P11245 290 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 HIST1H1DP16402 221 aaKnown RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 TBPP20226 339 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 GABRR1P24046 479 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 GCH1P30793 250 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 TIMP3P35625 211 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 QRFPP83859 136 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 PDZK1IP1Q13113 114 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 UNC119Q13432 240 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 RBMS2Q15434 407 aaKnown RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 CEACAM21Q3KPI0 293 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 ZNF260Q3ZCT1 412 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 ACTBL2Q562R1 376 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 METTL11BQ5VVY1 283 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 TMEM42Q69YG0 159 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 ALKBH2Q6NS38 261 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 LYPD6Q86Y78 171 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 C1orf174Q8IYL3 243 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 ZSCAN4Q8NAM6 433 aaPredicted RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 NAXEQ8NCW5 288 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 PXT1Q8NFP0 134 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 OR5A2Q8NGI9 324 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 OR1J1Q8NGS3 322 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 AQP3Q92482 292 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 CMBLQ96DG6 245 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 STARD4Q96DR4 205 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 MRPS24Q96EL2 167 aaKnown RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 MS4A3Q96HJ5 214 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 PRRT1Q99946 306 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 MICU1Q9BPX6 476 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 GINS4Q9BRT9 223 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 SFXN3Q9BWM7 321 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 LPAR5Q9H1C0 372 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 C20orf85Q9H1P6 137 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 OPN3Q9H1Y3 402 aaPredicted RBP8.01□□□□□ -1.13
SS18-220ENST00000582092 PIGMQ9H3S5 423 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 TINAGQ9UJW2 476 aa8.01□□□□□ -1.13
SS18-220ENST00000582092 OR5B21A6NL26 309 aa8□□□□□ -1.13
SS18-220ENST00000582092 SERPINE3A8MV23 424 aa8□□□□□ -1.13
SS18-220ENST00000582092 ZNF732B4DXR9 585 aa8□□□□□ -1.13
SS18-220ENST00000582092 ARPC1BO15143 372 aaKnown RBP8□□□□□ -1.13
SS18-220ENST00000582092 SOCS1O15524 211 aa8□□□□□ -1.13
SS18-220ENST00000582092 WISP2O76076 250 aa8□□□□□ -1.13
SS18-220ENST00000582092 NGFP01138 241 aa8□□□□□ -1.13
SS18-220ENST00000582092 CD3DP04234 171 aa8□□□□□ -1.13
SS18-220ENST00000582092 CSN2P05814 226 aa8□□□□□ -1.13
SS18-220ENST00000582092 MELTFP08582 738 aa8□□□□□ -1.13
SS18-220ENST00000582092 FAM157BP0CG42 384 aa8□□□□□ -1.13
SS18-220ENST00000582092 AMY2BP19961 511 aa8□□□□□ -1.13
SS18-220ENST00000582092 GPM6AP51674 278 aa8□□□□□ -1.13
SS18-220ENST00000582092 PRSS12P56730 875 aa8□□□□□ -1.13
SS18-220ENST00000582092 RRAS2P62070 204 aaPredicted RBP8□□□□□ -1.13
SS18-220ENST00000582092 TSPAN5P62079 268 aa8□□□□□ -1.13
SS18-220ENST00000582092 MZT1Q08AG7 82 aa8□□□□□ -1.13
SS18-220ENST00000582092 FOXF2Q12947 444 aa8□□□□□ -1.13
SS18-220ENST00000582092 MAB21L1Q13394 359 aa8□□□□□ -1.13
SS18-220ENST00000582092 TNK1Q13470 666 aa8□□□□□ -1.13
SS18-220ENST00000582092 GUSBP1Q15486 140 aa8□□□□□ -1.13
SS18-220ENST00000582092 TSC22D1Q15714 1073 aa8□□□□□ -1.13
SS18-220ENST00000582092 MOGAT2Q3SYC2 334 aa8□□□□□ -1.13
SS18-220ENST00000582092 ZFP69Q49AA0 526 aa8□□□□□ -1.13
SS18-220ENST00000582092 SCGB2B2Q4G0G5 96 aa8□□□□□ -1.13
SS18-220ENST00000582092 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
SS18-220ENST00000582092 ZNF573Q86YE8 665 aa8□□□□□ -1.13
SS18-220ENST00000582092 DOLPP1Q86YN1 238 aa8□□□□□ -1.13
SS18-220ENST00000582092 LIX1LQ8IVB5 337 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms