RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 RNF144BQ7Z419 303 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 ZNF573Q86YE8 665 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 CCDC54Q8NEL0 328 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 NANPQ8TBE9 248 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 C22orf15Q8WYQ4 148 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 RGP1Q92546 391 aaPredicted RBP16.66■□□□□ 0.26
SS18-218ENST00000581021 FGGYQ96C11 551 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 PDCD1LG2Q9BQ51 273 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 NRIP2Q9BQI9 281 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 MRI1Q9BV20 369 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 NLKQ9UBE8 527 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 DNAJB11Q9UBS4 358 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 DIMT1Q9UNQ2 313 aaKnown RBP16.66■□□□□ 0.26
SS18-218ENST00000581021 SIRT4Q9Y6E7 314 aaPredicted RBP16.66■□□□□ 0.26
SS18-218ENST00000581021 HSPE1-MOB4S4R3N1 261 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 IGHV3OR16-10A0A075B7F0 116 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 OR2AT4A6NND4 320 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 F8VVB4 439 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 F8VWA3 439 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 XPNPEP2O43895 674 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 LALBAP00709 142 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 IGHV4-38-2P0DP08 117 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 PSG2P11465 335 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 DCKP27707 260 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 IKZF1Q13422 519 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 TUSC1Q2TAM9 212 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 BTNL3Q6UXE8 466 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 BTN2A1Q7KYR7 527 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 C8orf59Q8N0T1 100 aaPredicted RBP16.65■□□□□ 0.26
SS18-218ENST00000581021 ST8SIA4Q92187 359 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 GGHQ92820 318 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 UPRTQ96BW1 309 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 MRPL48Q96GC5 212 aaKnown RBP16.65■□□□□ 0.26
SS18-218ENST00000581021 SLC6A7Q99884 636 aa16.65■□□□□ 0.26
SS18-218ENST00000581021 SOX21Q9Y651 276 aaPredicted RBP16.65■□□□□ 0.26
SS18-218ENST00000581021 STAB1Q9NY15 2570 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 ENSAO43768 121 aaKnown RBP16.64■□□□□ 0.25
SS18-218ENST00000581021 NOS1APO75052 506 aaPredicted RBP16.64■□□□□ 0.25
SS18-218ENST00000581021 FGF12P61328 243 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 ACP7Q6ZNF0 438 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 EGFL6Q8IUX8 553 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 BCL6BQ8N143 479 aaPredicted RBP16.64■□□□□ 0.25
SS18-218ENST00000581021 ZNF676Q8N7Q3 588 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 ZNF485Q8NCK3 441 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 ZNF671Q8TAW3 534 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 RPS4Y2Q8TD47 263 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 PP6455Q8WZ26 134 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 TMIGD2Q96BF3 282 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 C10orf35Q96D05 121 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 HES4Q9HCC6 221 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 ZNF69Q9UC07 566 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 HHLA2Q9UM44 414 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 MAB21L2Q9Y586 359 aa16.64■□□□□ 0.25
SS18-218ENST00000581021 SIGLEC5O15389 551 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 GATBO75879 557 aaKnown RBP16.63■□□□□ 0.25
SS18-218ENST00000581021 VENTXO95231 258 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 PLATP00750 562 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 SFTPBP07988 381 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 MMP9P14780 707 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 CEBPDP49716 269 aaPredicted RBP16.63■□□□□ 0.25
SS18-218ENST00000581021 ERVK11-1P61568 191 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 ARMCX4Q5H9R4 360 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 CRIP3Q6Q6R5 217 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 UTS2BQ765I0 119 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 SLC36A1Q7Z2H8 476 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 TEX29Q8N6K0 151 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 CD177Q8N6Q3 437 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 OR13C3Q8NGS6 347 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 PKIBQ9C010 78 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 DNTTIP1Q9H147 329 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 OCEL1Q9H607 264 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 ELL3Q9HB65 397 aaPredicted RBP16.63■□□□□ 0.25
SS18-218ENST00000581021 RPUSD1Q9UJJ7 312 aaKnown RBP16.63■□□□□ 0.25
SS18-218ENST00000581021 SLC7A11Q9UPY5 501 aa16.63■□□□□ 0.25
SS18-218ENST00000581021 CAB39Q9Y376 341 aaPredicted RBP16.63■□□□□ 0.25
SS18-218ENST00000581021 RNF212BA8MTL3 300 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 TCF21O43680 179 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 ACAA1P09110 424 aaPredicted RBP16.62■□□□□ 0.25
SS18-218ENST00000581021 PPIAL4GP0DN37 164 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 ATF1P18846 271 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 GBX2P52951 348 aaPredicted RBP16.62■□□□□ 0.25
SS18-218ENST00000581021 IL24Q13007 206 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 CD276Q5ZPR3 534 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 ASPHD2Q6ICH7 369 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 PHC2Q8IXK0 858 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 TMEM80Q96HE8 168 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 TBX15Q96SF7 602 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 VCXQ9H320 206 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 MTCH1Q9NZJ7 389 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 PSORS1C1Q9UIG5 152 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 NUP50Q9UKX7 468 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 POLDIP2Q9Y2S7 368 aa16.62■□□□□ 0.25
SS18-218ENST00000581021 TRAV40A0A0B4J280 105 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 NKX6-3A6NJ46 265 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 TMEM212A6NML5 194 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 NDUFB3O43676 98 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 PIPP12273 146 aaPredicted RBP16.61■□□□□ 0.25
SS18-218ENST00000581021 ZNF20P17024 532 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 AZGP1P25311 298 aaKnown RBP16.61■□□□□ 0.25
SS18-218ENST00000581021 FUT6P51993 359 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms