RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 H2BFMP0C1H6 154 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 CPEP16870 476 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 ZNF32P17041 273 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 CPT2P23786 658 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 PSMB10P40306 273 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 OPRL1P41146 370 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 PITPNBP48739 271 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 TAF13Q15543 124 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 LIPKQ5VXJ0 399 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 DHRS7BQ6IAN0 325 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-210ENST00000580713 DEGS2Q6QHC5 323 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 NLRC3Q7RTR2 1065 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 ZFP41Q8N8Y5 198 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 AKR7LQ8NHP1 331 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 C16orf95Q9H693 158 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 TMEM165Q9HC07 324 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 NDUFA13Q9P0J0 144 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 CLN8Q9UBY8 286 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 LRP12Q9Y561 859 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 TIMM10BQ9Y5J6 103 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
TOP3A-210ENST00000580713 LOC100509620A0A075B734 347 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 SMIM31A0A1B0GVY4 71 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 E9PI62 339 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 H3BSA7 217 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 P2RY10O00398 339 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 SGCEO43556 437 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 DOK2O60496 412 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 SFTPBP07988 381 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CD36P16671 472 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CELP19835 753 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 HSD11B1P28845 292 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 TGFBR2P37173 567 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 TGM4P49221 684 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 RGS6P49758 472 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 GTF2A1P52655 376 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 GRB2P62993 217 aaKnown RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 PSG7Q13046 419 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 GPR50Q13585 617 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 TPBGQ13641 420 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CCDC58Q4VC31 144 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CCDC92Q53HC0 331 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 RPL22L1Q6P5R6 122 aaKnown RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CLVS1Q8IUQ0 354 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 SCCPDHQ8NBX0 429 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 DACT3Q96B18 629 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 YIPF6Q96EC8 236 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 OR2V2Q96R30 315 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 ATF6BQ99941 703 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 TMEM246Q9BRR3 403 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 OR2H1Q9GZK4 316 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 HDHD2Q9H0R4 259 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 DPAGT1Q9H3H5 408 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 NIPAL2Q9H841 368 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
TOP3A-210ENST00000580713 IL19Q9UHD0 177 aa8.89□□□□□ -0.99
TOP3A-210ENST00000580713 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 BTBD17A6NE02 478 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 IFNL4K9M1U5 179 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 OGG1O15527 345 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ENSAO43768 121 aaKnown RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 TOX4O94842 621 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 MPIG6BO95866 241 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 CYB5R3P00387 301 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 DCTDP32321 178 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 CFHR2P36980 270 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 IER3P46695 156 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 PSG4Q00888 419 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ECH1Q13011 328 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ALKBH1Q13686 389 aaKnown RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 CDK5R1Q15078 307 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 SSX1Q16384 188 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ZNF829Q3KNS6 432 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 GPR107Q5VW38 600 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 DMKNQ6E0U4 476 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ARL9Q6T311 187 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 OR1F12Q8NHA8 337 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 ZNF420Q8TAQ5 688 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 LHX4Q969G2 390 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 KCNJ15Q99712 375 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 COQ7Q99807 217 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 FUNDC2Q9BWH2 189 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 WNT5BQ9H1J7 359 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 NDUFB11Q9NX14 153 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 SIRT4Q9Y6E7 314 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-210ENST00000580713 R4GMQ9 66 aa8.88□□□□□ -0.99
TOP3A-210ENST00000580713 IGHV1-69DA0A0B4J2H0 117 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 TRBV2A0A0J9YWF9 115 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 A0A0U1RQK1 487 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 OR6C6A6NF89 314 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 LOC110117498-PIK3R3F6TDL0 507 aa8.87□□□□□ -0.99
TOP3A-210ENST00000580713 NOL3O60936 208 aaKnown RBP8.87□□□□□ -0.99
TOP3A-210ENST00000580713 SRSF10O75494 262 aaKnown RBP8.87□□□□□ -0.99
TOP3A-210ENST00000580713 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms